RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 SNX4O95219 450 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 CLDN9O95484 217 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 C1QBP02746 253 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 HIST1H2AGP0C0S8 130 aaPredicted RBP11.85□□□□□ -0.51
SPIN3-236ENST00000640131 HIST1H2ADP20671 130 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 CASP9P55211 416 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 GABARAPL2P60520 117 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 LRRC74AQ0VAA2 488 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 KCNC3Q14003 757 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 ZNF169Q14929 603 aaPredicted RBP11.85□□□□□ -0.51
SPIN3-236ENST00000640131 C6orf141Q5SZD1 244 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 ARMC4Q5T2S8 1044 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 LCN8Q6JVE9 175 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 CLEC4FQ8N1N0 589 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 SMG7Q92540 1137 aaKnown RBP11.85□□□□□ -0.51
SPIN3-236ENST00000640131 HIST1H2AHQ96KK5 128 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 OR52E6Q96RD3 313 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 NRTNQ99748 197 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 HIST1H2AJQ99878 128 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 H2AFJQ9BTM1 129 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 HEBP1Q9NRV9 189 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 ANAPC2Q9UJX6 822 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 PCDHB3Q9Y5E6 796 aa11.85□□□□□ -0.51
SPIN3-236ENST00000640131 TP53BP1Q12888 1972 aaPredicted RBP11.85□□□□□ -0.51
SPIN3-236ENST00000640131 PIPSLA2A3N6 862 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 GSTA4O15217 222 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 FGBP02675 491 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 BCKDHAP12694 445 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 AOAHP28039 575 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 PDHA2P29803 388 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 EMX1Q04741 257 aaPredicted RBP11.84□□□□□ -0.51
SPIN3-236ENST00000640131 MEP1AQ16819 746 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 ZNF425Q6IV72 752 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 C8orf59Q8N0T1 100 aaPredicted RBP11.84□□□□□ -0.51
SPIN3-236ENST00000640131 MRPL43Q8N983 215 aaKnown RBP11.84□□□□□ -0.51
SPIN3-236ENST00000640131 NSMCE2Q96MF7 247 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 ACSL5Q9ULC5 683 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 K7ESM1 405 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 PSMB9P28065 219 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 CDKN2CP42773 168 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 BPIFB3P59826 476 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 EPS8Q12929 822 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 TIGD4Q8IY51 512 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 RBPMSQ93062 196 aaKnown RBP11.84□□□□□ -0.51
SPIN3-236ENST00000640131 PPP3R2Q96LZ3 170 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 ZBTB18Q99592 522 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 SLC25A37Q9NYZ2 338 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 LIMD1Q9UGP4 676 aa11.84□□□□□ -0.51
SPIN3-236ENST00000640131 ZNF106Q9H2Y7 1883 aaKnown RBP11.84□□□□□ -0.51
SPIN3-236ENST00000640131 TCRBV5S2A0A599 114 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 LDOC1O95751 146 aaPredicted RBP11.83□□□□□ -0.51
SPIN3-236ENST00000640131 GBAP04062 536 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 SLC6A11P48066 632 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 RFX2P48378 723 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 LAPTM4AQ15012 233 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 SYTL3Q4VX76 610 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 GPR156Q8NFN8 814 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 GANCQ8TET4 914 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 RSPRY1Q96DX4 576 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 OR2A14Q96R47 310 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 NPAS1Q99742 590 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 MS4A7Q9GZW8 240 aaPredicted RBP11.83□□□□□ -0.51
SPIN3-236ENST00000640131 ZNF639Q9UID6 485 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 ELF5Q9UKW6 265 aaPredicted RBP11.83□□□□□ -0.51
SPIN3-236ENST00000640131 MKLN1Q9UL63 735 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 NEUROG3Q9Y4Z2 214 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 PCDHGA2Q9Y5H1 932 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 SLC22A7Q9Y694 548 aa11.83□□□□□ -0.51
SPIN3-236ENST00000640131 OTOL1A6NHN0 477 aaPredicted RBP11.83□□□□□ -0.52
SPIN3-236ENST00000640131 EFCAB9A8MZ26 197 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 SMLR1H3BR10 107 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 TIMP2P16035 220 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 RFC2P35250 354 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 CSNK1DP48730 415 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 PER3P56645 1201 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 CHIT1Q13231 466 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 ARHGAP15Q53QZ3 475 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 SPANXN2Q5MJ10 180 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 TFAP2EQ6VUC0 442 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 MSRB3Q8IXL7 192 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 CHDHQ8NE62 594 aaPredicted RBP11.83□□□□□ -0.52
SPIN3-236ENST00000640131 TRPV3Q8NET8 790 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 OR7G3Q8NG95 312 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 MCCC1Q96RQ3 725 aaPredicted RBP11.83□□□□□ -0.52
SPIN3-236ENST00000640131 SLC19A3Q9BZV2 496 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 SLC32A1Q9H598 525 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 IL23AQ9NPF7 189 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 ERVK13-1Q9NX77 482 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 MRPS23Q9Y3D9 190 aaKnown RBP11.83□□□□□ -0.52
SPIN3-236ENST00000640131 INSL6Q9Y581 213 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 SPEGQ15772 3267 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 C17orf113A0A1B0GUU1 675 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 AQP12BA6NM10 295 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 WWP2O00308 870 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 PSIP1O75475 530 aaKnown RBP11.83□□□□□ -0.52
SPIN3-236ENST00000640131 AGXTP21549 392 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 SLC14A1Q13336 389 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 NAE1Q13564 534 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 NKG7Q16617 165 aa11.83□□□□□ -0.52
SPIN3-236ENST00000640131 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms