RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	CCDC85B	Q15834	202 aa	Predicted RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	INA	Q16352	499 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PRSS36	Q5K4E3	855 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	OR4C11	Q6IEV9	310 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	KBTBD8	Q8NFY9	601 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	OR5D16	Q8NGK9	328 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	RASSF5	Q8WWW0	418 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	NRTN	Q99748	197 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PRRG3	Q9BZD7	231 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	EPHX3	Q9H6B9	360 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	KLHL3	Q9UH77	587 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	EFCAB10	A6NFE3	127 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	TLR4	O00206	839 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	STS	P08842	583 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	AK4	P27144	223 aa	Predicted RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	TIMM50	Q3ZCQ8	353 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PRRT3	Q5FWE3	981 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CLEC12A	Q5QGZ9	265 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	TMEM107	Q6UX40	140 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PIWIL3	Q7Z3Z3	882 aa	Known RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	B3GNT8	Q7Z7M8	397 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	TRIM73	Q86UV7	250 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PARG	Q86W56	976 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	SLC30A8	Q8IWU4	369 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	KLHDC8A	Q8IYD2	350 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	OR5K2	Q8NHB8	316 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	KAT2A	Q92830	837 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	SLC38A4	Q969I6	547 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	MTERF3	Q96E29	417 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	UCK2	Q9BZX2	261 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	MS4A12	Q9NXJ0	267 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	SNX7	Q9UNH6	387 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	HEBP2	Q9Y5Z4	205 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	OTOL1	A6NHN0	477 aa	Predicted RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PRKRA	O75569	313 aa	Known RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	MED26	O95402	600 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CD247	P20963	164 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PBX2	P40425	430 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	MNX1	P50219	401 aa	Predicted RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	RNF144A	P50876	292 aa	Predicted RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	GABARAPL2	P60520	117 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	MTAP	Q13126	283 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CTU2	Q2VPK5	515 aa	Known RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	TMEM52B	Q4KMG9	183 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	ZNF542P	Q5EBM4	170 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	C9orf50	Q5SZB4	431 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	IKBIP	Q70UQ0	350 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PTOV1	Q86YD1	416 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	OR52E1	Q8NGJ3	308 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CLIP3	Q96DZ5	547 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	MIR1-1HG	Q9H1L0	117 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CXorf36	Q9H7Y0	433 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PELI2	Q9HAT8	420 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	WBP1L	Q9NX94	342 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	TEX10	Q9NXF1	929 aa	Predicted RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	GPR83	Q9NYM4	423 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	THAP10	Q9P2Z0	257 aa	Predicted RBP	7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	ENPP4	Q9Y6X5	453 aa		7.38	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PIKFYVE	Q9Y2I7	2098 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CASP8AP2	Q9UKL3	1982 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CENPF	P49454	3210 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	NLRC5	Q86WI3	1866 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	ANTXRL	A6NF34	631 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	SOBP	A7XYQ1	873 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	TMX2-CTNND1	H3BSU7	103 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	SLC22A1	O15245	554 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	EFEMP2	O95967	443 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	NCS1	P62166	190 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CSNK2B	P67870	215 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	EMX1	Q04741	257 aa	Predicted RBP	7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	ST3GAL4	Q11206	333 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CLCA4	Q14CN2	919 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	MAD2L1BP	Q15013	274 aa	Predicted RBP	7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	ZXDC	Q2QGD7	858 aa	Predicted RBP	7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	DEFB134	Q4QY38	66 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CRB2	Q5IJ48	1285 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	COLEC12	Q5KU26	742 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	SPANXN2	Q5MJ10	180 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	OLIG3	Q7RTU3	272 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	NATD1	Q8N6N6	113 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	HORMAD2	Q8N7B1	307 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	TAMM41	Q96BW9	452 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	SLC38A2	Q96QD8	506 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	ITPA	Q9BY32	194 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	DCSTAMP	Q9H295	470 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PLPP1	O14494	284 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	PCDH17	O14917	1159 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	BCAS1	O75363	584 aa	Predicted RBP	7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	FUT4	P22083	530 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	CERS1	P27544	350 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	AKT2	P31751	481 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	SEPHS1	P49903	392 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	WNT3	P56703	355 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	DEFA1	P59665	94 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	DEFA3	P59666	94 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	RPS3A	P61247	264 aa	Known RBP	7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	MADCAM1	Q13477	382 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	ARMCX4	Q5H9R4	360 aa		7.37	□□□□□ -1.23
HNRNPU-223	ENST00000640001	ZNF311	Q5JNZ3	666 aa		7.37	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms