RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ZGRF1Q86YA3 2104 aa17.65■□□□□ 0.42
CLN6-221ENST00000637494 SPTAN1Q13813 2472 aaKnown RBP17.64■□□□□ 0.42
CLN6-221ENST00000637494 A0A087WUV0 522 aaPredicted RBP17.64■□□□□ 0.41
CLN6-221ENST00000637494 MYOCOSA0A1B0GUC4 107 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 PRSS44E7EML9 344 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 H0YIV9 168 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 TFECO14948 347 aaPredicted RBP17.64■□□□□ 0.41
CLN6-221ENST00000637494 PEX1O43933 1283 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 CLDN9O95484 217 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 COL6A2P12110 1019 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 GPR143P51810 404 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 CCNG1P51959 295 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 SMSP52788 366 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 CPSF6Q16630 551 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLN6-221ENST00000637494 TECRLQ5HYJ1 363 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 LGSNQ5TDP6 509 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 CYP20A1Q6UW02 462 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 GPR180Q86V85 440 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 CPSF7Q8N684 471 aaKnown RBP17.64■□□□□ 0.41
CLN6-221ENST00000637494 NOA1Q8NC60 698 aaKnown RBP17.64■□□□□ 0.41
CLN6-221ENST00000637494 PTPMT1Q8WUK0 201 aaPredicted RBP17.64■□□□□ 0.41
CLN6-221ENST00000637494 TANKQ92844 425 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 RBM18Q96H35 190 aaKnown RBP17.64■□□□□ 0.41
CLN6-221ENST00000637494 CCDC120Q96HB5 630 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 ART5Q96L15 291 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 RUBCNLQ9H714 662 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 RPF2Q9H7B2 306 aaKnown RBP17.64■□□□□ 0.41
CLN6-221ENST00000637494 WDR41Q9HAD4 459 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 LYARQ9NX58 379 aaKnown RBP17.64■□□□□ 0.41
CLN6-221ENST00000637494 MYOTQ9UBF9 498 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 ZNF223Q9UK11 482 aaPredicted RBP17.64■□□□□ 0.41
CLN6-221ENST00000637494 UTP20O75691 2785 aaKnown RBP17.64■□□□□ 0.41
CLN6-221ENST00000637494 POLEQ07864 2286 aa17.64■□□□□ 0.41
CLN6-221ENST00000637494 SVILO95425 2214 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 OR2J2O76002 312 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 RPS13P62277 151 aaKnown RBP17.63■□□□□ 0.41
CLN6-221ENST00000637494 PLIN5Q00G26 463 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 TTC19Q6DKK2 380 aaPredicted RBP17.63■□□□□ 0.41
CLN6-221ENST00000637494 BNC2Q6ZN30 1099 aaPredicted RBP17.63■□□□□ 0.41
CLN6-221ENST00000637494 MRGPRGQ86SM5 289 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 ZNF227Q86WZ6 799 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 SULF2Q8IWU5 870 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 ZCCHC7Q8N3Z6 543 aaKnown RBP17.63■□□□□ 0.41
CLN6-221ENST00000637494 ZNF808Q8N4W9 903 aaPredicted RBP17.63■□□□□ 0.41
CLN6-221ENST00000637494 CEP112Q8N8E3 955 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 PTGR2Q8N8N7 351 aaPredicted RBP17.63■□□□□ 0.41
CLN6-221ENST00000637494 OR8K3Q8NH51 312 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 KIF18AQ8NI77 898 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 PHF21BQ96EK2 531 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 GPR78Q96P69 363 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 PELOQ9BRX2 385 aaKnown RBP17.63■□□□□ 0.41
CLN6-221ENST00000637494 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.63■□□□□ 0.41
CLN6-221ENST00000637494 ZNF180Q9UJW8 692 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 ZNF835Q9Y2P0 537 aa17.63■□□□□ 0.41
CLN6-221ENST00000637494 MAST4O15021 2626 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 WWP2O00308 870 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 PLPP1O14494 284 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 PRRG2O14669 202 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 SIX3O95343 332 aaPredicted RBP17.62■□□□□ 0.41
CLN6-221ENST00000637494 TNFRSF17Q02223 184 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 ID2Q02363 134 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 ART3Q13508 389 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 CUL3Q13618 768 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 C3AR1Q16581 482 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 IL20RBQ6UXL0 311 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 SIAH3Q8IW03 269 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 RNF175Q8N4F7 328 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 L3MBTL4Q8NA19 623 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 SLC2A12Q8TD20 617 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 ISL2Q96A47 359 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 SERPINI1Q99574 410 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 SORBS1Q9BX66 1292 aaKnown RBP17.62■□□□□ 0.41
CLN6-221ENST00000637494 NOL11Q9H8H0 719 aaKnown RBP17.62■□□□□ 0.41
CLN6-221ENST00000637494 PSD3Q9NYI0 1048 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 TINAGQ9UJW2 476 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 ENTPD4Q9Y227 616 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 RNF11Q9Y3C5 154 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 DOPEY1Q5JWR5 2465 aa17.62■□□□□ 0.41
CLN6-221ENST00000637494 CROCCQ5TZA2 2017 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 EXOC1LA0A1B0GW35 172 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 LRRC14BA6NHZ5 514 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 STX16-NPEPL1H3BU86 382 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 FOXE1O00358 373 aaPredicted RBP17.61■□□□□ 0.41
CLN6-221ENST00000637494 STX16O14662 325 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 HNRNPRO43390 633 aaKnown RBP17.61■□□□□ 0.41
CLN6-221ENST00000637494 FGF17O60258 216 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 PRKNO60260 465 aaPredicted RBP17.61■□□□□ 0.41
CLN6-221ENST00000637494 MAGEA12P43365 314 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 STT3AP46977 705 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 RNF4P78317 190 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 PLGLB1Q02325 96 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 C10orf62Q5T681 223 aaPredicted RBP17.61■□□□□ 0.41
CLN6-221ENST00000637494 XKRXQ6PP77 449 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 PAOXQ6QHF9 649 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 OPN5Q6U736 354 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 Q6ZPB1 254 aaPredicted RBP17.61■□□□□ 0.41
CLN6-221ENST00000637494 NUDT13Q86X67 352 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 OR4N5Q8IXE1 308 aa17.61■□□□□ 0.41
CLN6-221ENST00000637494 PLD6Q8N2A8 252 aaKnown RBP17.61■□□□□ 0.41
CLN6-221ENST00000637494 PSD4Q8NDX1 1056 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms