RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MYNNQ9NPC7 610 aa15.05■□□□□ -0
CLN6-216ENST00000636876 SEMA3GQ9NS98 782 aa15.05■□□□□ -0
CLN6-216ENST00000636876 FGFR1OP2Q9NVK5 253 aa15.05■□□□□ -0
CLN6-216ENST00000636876 PTPRQQ9UMZ3 2332 aa15.05■□□□□ -0
CLN6-216ENST00000636876 ITPR1Q14643 2758 aa15.05■□□□□ -0
CLN6-216ENST00000636876 GOLGA8QA0A0J9YX86 632 aa15.04■□□□□ -0
CLN6-216ENST00000636876 GOLGA8OA6NCC3 632 aa15.04■□□□□ -0
CLN6-216ENST00000636876 ZNF891A8MT65 544 aaPredicted RBP15.04■□□□□ -0
CLN6-216ENST00000636876 GOLGA8NF8WBI6 632 aa15.04■□□□□ -0
CLN6-216ENST00000636876 CLDN4O14493 209 aa15.04■□□□□ -0
CLN6-216ENST00000636876 POLR3GO15318 223 aaPredicted RBP15.04■□□□□ -0
CLN6-216ENST00000636876 PRMT3O60678 531 aa15.04■□□□□ -0
CLN6-216ENST00000636876 DIAPH2O60879 1101 aa15.04■□□□□ -0
CLN6-216ENST00000636876 PRKRAO75569 313 aaKnown RBP15.04■□□□□ -0
CLN6-216ENST00000636876 IL3P08700 152 aa15.04■□□□□ -0
CLN6-216ENST00000636876 LBPP18428 481 aa15.04■□□□□ -0
CLN6-216ENST00000636876 SDC1P18827 310 aa15.04■□□□□ -0
CLN6-216ENST00000636876 MMP11P24347 488 aa15.04■□□□□ -0
CLN6-216ENST00000636876 TACR1P25103 407 aa15.04■□□□□ -0
CLN6-216ENST00000636876 HSD17B7P56937 341 aa15.04■□□□□ -0
CLN6-216ENST00000636876 ERVK-8P63133 956 aa15.04■□□□□ -0
CLN6-216ENST00000636876 BTG2P78543 158 aa15.04■□□□□ -0
CLN6-216ENST00000636876 MC1RQ01726 317 aa15.04■□□□□ -0
CLN6-216ENST00000636876 EMX2Q04743 252 aa15.04■□□□□ -0
CLN6-216ENST00000636876 MAD2L1Q13257 205 aaPredicted RBP15.04■□□□□ -0
CLN6-216ENST00000636876 UGT8Q16880 541 aa15.04■□□□□ -0
CLN6-216ENST00000636876 OGFOD2Q6N063 350 aa15.04■□□□□ -0
CLN6-216ENST00000636876 RIPOR1Q6ZS17 1223 aa15.04■□□□□ -0
CLN6-216ENST00000636876 RAB43Q86YS6 212 aa15.04■□□□□ -0
CLN6-216ENST00000636876 MMP21Q8N119 569 aa15.04■□□□□ -0
CLN6-216ENST00000636876 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.04■□□□□ -0
CLN6-216ENST00000636876 ACTRT2Q8TDY3 377 aa15.04■□□□□ -0
CLN6-216ENST00000636876 TANKQ92844 425 aa15.04■□□□□ -0
CLN6-216ENST00000636876 C1orf50Q9BV19 199 aa15.04■□□□□ -0
CLN6-216ENST00000636876 FAIM2Q9BWQ8 316 aa15.04■□□□□ -0
CLN6-216ENST00000636876 PRDM9Q9NQV7 894 aa15.04■□□□□ -0
CLN6-216ENST00000636876 PRTFDC1Q9NRG1 225 aa15.04■□□□□ -0
CLN6-216ENST00000636876 ASIC5Q9NY37 505 aa15.04■□□□□ -0
CLN6-216ENST00000636876 WBP11Q9Y2W2 641 aaKnown RBP15.04■□□□□ -0
CLN6-216ENST00000636876 PCDHA9Q9Y5H5 950 aa15.04■□□□□ -0
CLN6-216ENST00000636876 NBEAQ8NFP9 2946 aa15.04■□□□□ -0
CLN6-216ENST00000636876 IGKV3D-11A0A0A0MRZ8 115 aa15.03■□□□□ -0
CLN6-216ENST00000636876 PCDH17O14917 1159 aa15.03■□□□□ -0
CLN6-216ENST00000636876 PGRMC2O15173 223 aa15.03■□□□□ -0
CLN6-216ENST00000636876 CTNSO60931 367 aa15.03■□□□□ -0
CLN6-216ENST00000636876 ALOX12BO75342 701 aa15.03■□□□□ -0
CLN6-216ENST00000636876 PRPS2P11908 318 aa15.03■□□□□ -0
CLN6-216ENST00000636876 MAOAP21397 527 aa15.03■□□□□ -0
CLN6-216ENST00000636876 ITPKBP27987 946 aa15.03■□□□□ -0
CLN6-216ENST00000636876 OTX2P32243 289 aa15.03■□□□□ -0
CLN6-216ENST00000636876 IDH3AP50213 366 aa15.03■□□□□ -0
CLN6-216ENST00000636876 AQP5P55064 265 aa15.03■□□□□ -0
CLN6-216ENST00000636876 UCNP55089 124 aa15.03■□□□□ -0
CLN6-216ENST00000636876 SLC13A2Q13183 592 aa15.03■□□□□ -0
CLN6-216ENST00000636876 CRTC2Q53ET0 693 aaPredicted RBP15.03■□□□□ -0
CLN6-216ENST00000636876 IL23RQ5VWK5 629 aa15.03■□□□□ -0
CLN6-216ENST00000636876 NXNQ6DKJ4 435 aa15.03■□□□□ -0
CLN6-216ENST00000636876 FAAH2Q6GMR7 532 aa15.03■□□□□ -0
CLN6-216ENST00000636876 OR52E8Q6IFG1 317 aa15.03■□□□□ -0
CLN6-216ENST00000636876 FAM71E1Q6IPT2 247 aa15.03■□□□□ -0
CLN6-216ENST00000636876 TMEM205Q6UW68 189 aa15.03■□□□□ -0
CLN6-216ENST00000636876 CCDC81Q6ZN84 652 aa15.03■□□□□ -0
CLN6-216ENST00000636876 IKBIPQ70UQ0 350 aa15.03■□□□□ -0
CLN6-216ENST00000636876 PPP1R32Q7Z5V6 425 aa15.03■□□□□ -0
CLN6-216ENST00000636876 PARP9Q8IXQ6 854 aa15.03■□□□□ -0
CLN6-216ENST00000636876 LIX1Q8N485 282 aa15.03■□□□□ -0
CLN6-216ENST00000636876 CDC26Q8NHZ8 85 aa15.03■□□□□ -0
CLN6-216ENST00000636876 DNAJB14Q8TBM8 379 aa15.03■□□□□ -0
CLN6-216ENST00000636876 ADAMTS17Q8TE56 1095 aa15.03■□□□□ -0
CLN6-216ENST00000636876 METTL21AQ8WXB1 218 aa15.03■□□□□ -0
CLN6-216ENST00000636876 TSLPQ969D9 159 aa15.03■□□□□ -0
CLN6-216ENST00000636876 NACC2Q96BF6 587 aa15.03■□□□□ -0
CLN6-216ENST00000636876 THOC1Q96FV9 657 aaKnown RBP15.03■□□□□ -0
CLN6-216ENST00000636876 PTCHD1Q96NR3 888 aa15.03■□□□□ -0
CLN6-216ENST00000636876 TSSK3Q96PN8 268 aa15.03■□□□□ -0
CLN6-216ENST00000636876 OR52B2Q96RD2 323 aa15.03■□□□□ -0
CLN6-216ENST00000636876 TRIM55Q9BYV6 548 aa15.03■□□□□ -0
CLN6-216ENST00000636876 NPHS2Q9NP85 383 aa15.03■□□□□ -0
CLN6-216ENST00000636876 NECTIN3Q9NQS3 549 aa15.03■□□□□ -0
CLN6-216ENST00000636876 NOP53Q9NZM5 478 aaKnown RBP15.03■□□□□ -0
CLN6-216ENST00000636876 EIF3LQ9Y262 564 aaKnown RBP15.03■□□□□ -0
CLN6-216ENST00000636876 HS3ST3B1Q9Y662 390 aa15.03■□□□□ -0
CLN6-216ENST00000636876 C1orf226A1L170 272 aa15.02■□□□□ -0
CLN6-216ENST00000636876 GLOD5A6NK44 160 aa15.02■□□□□ -0
CLN6-216ENST00000636876 TGFBR3LH3BV60 316 aa15.02■□□□□ -0
CLN6-216ENST00000636876 NKX2-8O15522 239 aa15.02■□□□□ -0
CLN6-216ENST00000636876 C8orf89P0DMQ9 161 aa15.02■□□□□ -0
CLN6-216ENST00000636876 TROVE2P10155 538 aaKnown RBP eCLIP15.02■□□□□ -0
CLN6-216ENST00000636876 PRKAR1AP10644 381 aa15.02■□□□□ -0
CLN6-216ENST00000636876 DRD2P14416 443 aa15.02■□□□□ -0
CLN6-216ENST00000636876 PPP2R1BP30154 601 aa15.02■□□□□ -0
CLN6-216ENST00000636876 ASMTP46597 345 aa15.02■□□□□ -0
CLN6-216ENST00000636876 C2orf80Q0P641 193 aa15.02■□□□□ -0
CLN6-216ENST00000636876 HEPACAMQ14CZ8 416 aa15.02■□□□□ -0
CLN6-216ENST00000636876 NSDHLQ15738 373 aa15.02■□□□□ -0
CLN6-216ENST00000636876 CGB2Q6NT52 195 aa15.02■□□□□ -0
CLN6-216ENST00000636876 SLC48A1Q6P1K1 146 aa15.02■□□□□ -0
CLN6-216ENST00000636876 LANCL3Q6ZV70 420 aa15.02■□□□□ -0
CLN6-216ENST00000636876 ACAD11Q709F0 780 aa15.02■□□□□ -0
CLN6-216ENST00000636876 SPATA19Q7Z5L4 167 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms