RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 ENKURQ8TC29 256 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 NEIL2Q969S2 332 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 CLIP3Q96DZ5 547 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 LYSMD1Q96S90 227 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 NELL2Q99435 816 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 BHLHE41Q9C0J9 482 aaPredicted RBP14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 ENOPH1Q9UHY7 261 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 SH2B3Q9UQQ2 575 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 PLXND1Q9Y4D7 1925 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 TRAV19A0A0A6YYK7 116 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 SMLR1H3BR10 107 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 KPNA5O15131 536 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 SLC16A5O15375 505 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 SGTAO43765 313 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 CD70P32970 193 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 SDC2P34741 201 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 RBBP4Q09028 425 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 TSTA3Q13630 321 aaPredicted RBP14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 TATDN3Q17R31 274 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 MPPE1Q53F39 396 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 PLEKHS1Q5SXH7 462 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 TRIM40Q6P9F5 258 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 XKRXQ6PP77 449 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 C17orf99Q6UX52 265 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 GDPGP1Q6ZNW5 385 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 COMMD6Q7Z4G1 85 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 TRIM69Q86WT6 500 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 OR2AP1Q8NGE2 309 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 WDR48Q8TAF3 677 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 C2orf15Q8WU43 125 aaKnown RBP14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 UPF1Q92900 1129 aaKnown RBP eCLIP14.29□□□□□ -0.126e-6■■■■□ 21.9
THUMPD1-206ENST00000636554 MAGEB10Q96LZ2 347 aaPredicted RBP14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 CASD1Q96PB1 797 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 C19orf43Q9BQ61 176 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 WFDC6Q9BQY6 131 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 STOML2Q9UJZ1 356 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 CARD8Q9Y2G2 431 aa14.29□□□□□ -0.12
THUMPD1-206ENST00000636554 HEPACAM2A8MVW5 462 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 H7C4K7 107 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 OR10H3O60404 316 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 ZNF780AO75290 641 aaPredicted RBP14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 GSTM1P09488 218 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 FURINP09958 794 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 OSMP13725 252 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 CSNK1DP48730 415 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 SNRPGP62308 76 aaKnown RBP14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 CYP4F8P98187 520 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 FAPQ12884 760 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 LMAN2Q12907 356 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 MLLT11Q13015 90 aaPredicted RBP14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 TAF12Q16514 161 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 USP45Q70EL2 814 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 RBM45Q8IUH3 476 aaKnown RBP14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 RASSF5Q8WWW0 418 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 MSLNLQ96KJ4 702 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 UCK2Q9BZX2 261 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 ARHGAP39Q9C0H5 1083 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 TMEM161AQ9NX61 479 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 ATP6V1HQ9UI12 483 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 KCND3Q9UK17 655 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 POLR1CO15160 346 aaPredicted RBP14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 AKR7A2O43488 359 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 GREM1O60565 184 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 CELF2O95319 508 aaKnown RBP14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 ARAFP10398 606 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 HSD3B1P14060 373 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 HSD3B2P26439 372 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 APEX1P27695 318 aaKnown RBP14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 IMPA1P29218 277 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 LRRC74AQ0VAA2 488 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 QPRTQ15274 297 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 ZNF630Q2M218 657 aaPredicted RBP14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 ATAT1Q5SQI0 421 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 USP30Q70CQ3 517 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.28□□□□□ -0.123e-7■□□□□ 11.2
THUMPD1-206ENST00000636554 HCAR2Q8TDS4 363 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 OVCA2Q8WZ82 227 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 SNAPC3Q92966 411 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 TRIM63Q969Q1 353 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 PPCDCQ96CD2 204 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 MCOLN1Q9GZU1 580 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 OR51B5Q9H339 312 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 ZDHHC6Q9H6R6 413 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 TOR4AQ9NXH8 423 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 DKK3Q9UBP4 350 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 B4GALT6Q9UBX8 382 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 ANGPT4Q9Y264 503 aa14.28□□□□□ -0.12
THUMPD1-206ENST00000636554 ARRDC5A6NEK1 342 aa14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 ICMTO60725 284 aa14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 CRYZL1O95825 349 aa14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 ADAP00813 363 aa14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 TGFB1P01137 390 aa14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 PSKH1P11801 424 aa14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 ELAVL4P26378 380 aaKnown RBP14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 CCND3P30281 292 aaPredicted RBP14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 CA8P35219 290 aa14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 ETV5P41161 510 aa14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 SPINT3P49223 89 aa14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 ETV1P50549 477 aa14.27□□□□□ -0.13
THUMPD1-206ENST00000636554 XKP51811 444 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms