RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 NCLNQ969V3 563 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 MTBPQ96DY7 904 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 MRPL57Q9BQC6 102 aaKnown RBP17.14■□□□□ 0.33
CLN6-214ENST00000636314 CCDC77Q9BR77 488 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 SORBS1Q9BX66 1292 aaKnown RBP17.14■□□□□ 0.33
CLN6-214ENST00000636314 HES7Q9BYE0 225 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 NOL11Q9H8H0 719 aaKnown RBP17.14■□□□□ 0.33
CLN6-214ENST00000636314 LRFN1Q9P244 771 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 PCTPQ9UKL6 214 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 RNF11Q9Y3C5 154 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 DCHS2Q6V1P9 2916 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 ADGRG4Q8IZF6 3080 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 PLPP1O14494 284 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 LDB3O75112 727 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 CLDN9O95484 217 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 FAM153BP0C7A2 387 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 CYB561P49447 251 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 CCNG1P51959 295 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 SERTAD2Q14140 314 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 FAM153CQ494X1 144 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 GDF7Q7Z4P5 450 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 TMEM132CQ8N3T6 1108 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 FAM98AQ8NCA5 519 aaKnown RBP17.13■□□□□ 0.33
CLN6-214ENST00000636314 OR52B6Q8NGF0 335 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 THAP3Q8WTV1 239 aaPredicted RBP17.13■□□□□ 0.33
CLN6-214ENST00000636314 SCMH1Q96GD3 660 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 CDK15Q96Q40 435 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 ALOXE3Q9BYJ1 711 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 PHF11Q9UIL8 331 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 PPIEQ9UNP9 301 aaKnown RBP17.13■□□□□ 0.33
CLN6-214ENST00000636314 KLF2Q9Y5W3 355 aaPredicted RBP17.13■□□□□ 0.33
CLN6-214ENST00000636314 CLCA3PQ9Y6N3 262 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 POLQO75417 2590 aa17.13■□□□□ 0.33
CLN6-214ENST00000636314 MYOCOSA0A1B0GUC4 107 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 OR7A17O14581 309 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 SLC25A12O75746 678 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 NEURL1O76050 574 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 PTX3P26022 381 aaPredicted RBP17.12■□□□□ 0.33
CLN6-214ENST00000636314 GCAP28676 217 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 ARFIP1P53367 373 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 SLAMF1Q13291 335 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 ZNF468Q5VIY5 522 aaPredicted RBP17.12■□□□□ 0.33
CLN6-214ENST00000636314 ADGRD1Q6QNK2 874 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 GSPT2Q8IYD1 628 aaKnown RBP17.12■□□□□ 0.33
CLN6-214ENST00000636314 ZCCHC7Q8N3Z6 543 aaKnown RBP17.12■□□□□ 0.33
CLN6-214ENST00000636314 LRRN4CLQ8ND94 238 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 OR14A16Q8NHC5 309 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 WDR20Q8TBZ3 569 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 DAZLQ92904 295 aaKnown RBP17.12■□□□□ 0.33
CLN6-214ENST00000636314 NSUN5Q96P11 429 aaKnown RBP17.12■□□□□ 0.33
CLN6-214ENST00000636314 MS4A12Q9NXJ0 267 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 ZNF223Q9UK11 482 aaPredicted RBP17.12■□□□□ 0.33
CLN6-214ENST00000636314 C2CD3Q4AC94 2353 aa17.12■□□□□ 0.33
CLN6-214ENST00000636314 TACC2O95359 2948 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 IQANK1A0A1B0GTG1 560 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 CCL21O00585 134 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 SP1P08047 785 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 RPS17P08708 135 aaKnown RBP17.11■□□□□ 0.33
CLN6-214ENST00000636314 TNNI3P19429 210 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 MST1P26927 711 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 HTR1EP28566 365 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 TRHRP34981 398 aaPredicted RBP17.11■□□□□ 0.33
CLN6-214ENST00000636314 PTGER4P35408 488 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 HLCSP50747 726 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 TNFRSF17Q02223 184 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 ID2Q02363 134 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 SRSF11Q05519 484 aaKnown RBP17.11■□□□□ 0.33
CLN6-214ENST00000636314 TRAF3Q13114 568 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 CUL3Q13618 768 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 TTC19Q6DKK2 380 aaPredicted RBP17.11■□□□□ 0.33
CLN6-214ENST00000636314 SLC25A25Q6KCM7 469 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 TIFABQ6ZNK6 161 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 GALNTL5Q7Z4T8 443 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 MRGPRGQ86SM5 289 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 GPR180Q86V85 440 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 ARMC10Q8N2F6 343 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 C7orf57Q8NEG2 295 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 TMEM125Q96AQ2 219 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 CCDC120Q96HB5 630 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 NTMT1Q9BV86 223 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 SEMA4BQ9NPR2 832 aaPredicted RBP17.11■□□□□ 0.33
CLN6-214ENST00000636314 PSMC3IPQ9P2W1 217 aaPredicted RBP17.11■□□□□ 0.33
CLN6-214ENST00000636314 SEC14L3Q9UDX4 400 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 VTI1BQ9UEU0 232 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 SH3BGRL2Q9UJC5 107 aa17.11■□□□□ 0.33
CLN6-214ENST00000636314 PKDREJQ9NTG1 2253 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 F8P00451 2351 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 A8MT66 165 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 FOXE1O00358 373 aaPredicted RBP17.1■□□□□ 0.33
CLN6-214ENST00000636314 ITGA10O75578 1167 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 ZFAND5O76080 213 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 UNC5CO95185 931 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 MLYCDO95822 493 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 COX7A2P14406 83 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 COX6B1P14854 86 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 TLX1P31314 330 aaPredicted RBP17.1■□□□□ 0.33
CLN6-214ENST00000636314 BUD31P41223 144 aaPredicted RBP17.1■□□□□ 0.33
CLN6-214ENST00000636314 GPR143P51810 404 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 NEK2P51955 445 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 SLC29A2Q14542 456 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms