RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 A0A1W2PPW3 197 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 KLHL33A6NCF5 533 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 M0QZ24 198 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 CLIC1O00299 241 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 MAN2B1O00754 1011 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 SLC31A1O15431 190 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 GPR137BO60478 399 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 BCAS2O75934 225 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 H2BFMP0C1H6 154 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 COL6A2P12110 1019 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 SEC13P55735 322 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 GPR68Q15743 365 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 CDNFQ49AH0 187 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 GPC2Q8N158 579 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF321PQ8N8H1 164 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 FANK1Q8TC84 345 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 CERKQ8TCT0 537 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 BRIX1Q8TDN6 353 aaKnown RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 LPGAT1Q92604 370 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 NSMAFQ92636 917 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 HAS2Q92819 552 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 DAZLQ92904 295 aaKnown RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 UCN3Q969E3 161 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 HDAC10Q969S8 669 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 TBC1D20Q96BZ9 403 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 PGAM5Q96HS1 289 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 C2orf42Q9NWW7 574 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 FTSJ1Q9UET6 329 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 PCYOX1Q9UHG3 505 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 YARS2Q9Y2Z4 477 aaKnown RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 TNS3Q68CZ2 1445 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 BLOC1S5-TXNDC5H3BN57 136 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 SOX1O00570 391 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 USP12O75317 370 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 HLA-DPB1P04440 258 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 SERPINE2P07093 398 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 UCHL1P09936 223 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 PTGER4P35408 488 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 PITPNBP48739 271 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 FAM214AQ32MH5 1076 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 FAM69BQ5VUD6 431 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 SLC36A4Q6YBV0 504 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF695Q8IW36 515 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 BEST3Q8N1M1 668 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 RBMXL3Q8N7X1 1067 aaKnown RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 FAM47BQ8NA70 645 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 CLEC1AQ8NC01 280 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 NLGN2Q8NFZ4 835 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 PHOSPHO1Q8TCT1 267 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 HAVCR2Q8TDQ0 301 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF431Q8TF32 576 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 C16orf78Q8WTQ4 265 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 MR1Q95460 341 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 MMABQ96EY8 250 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 PSD2Q9BQI7 771 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 DYNLRB1Q9NP97 96 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 TMPRSS4Q9NRS4 437 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 GPR83Q9NYM4 423 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 EXOGQ9Y2C4 368 aaKnown RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 TMED5Q9Y3A6 229 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 F5P12259 2224 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 SPATA31C2B4DYI2 1134 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 C17orf112F2Z3M2 114 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 PDLIM1O00151 329 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF17P17021 662 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 PTDSS1P48651 473 aaKnown RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 LGALS4P56470 323 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 MADCAM1Q13477 382 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 CLIP4Q8N3C7 705 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 OR5H2Q8NGV7 314 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF675Q8TD23 568 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 DDIT4LQ96D03 193 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 NUS1Q96E22 293 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 APOLD1Q96LR9 279 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 UHRF2Q96PU4 802 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 RHOJQ9H4E5 214 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 ACSS1Q9NUB1 689 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-212ENST00000636194 CPA4Q9UI42 421 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 ADAM29Q9UKF5 820 aa5.81□□□□□ -1.48
SCN1A-212ENST00000636194 ATP6V1G2-DDX39BF2Z307 99 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ACOX3O15254 700 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TRUB2O95900 331 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 XRCC1P18887 633 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 IL32P24001 234 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 KIR2DL3P43628 341 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 AMTP48728 403 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 DPYSL3Q14195 570 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SLC5A9Q2M3M2 681 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 PPP1R26Q5T8A7 1209 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SUSD4Q5VX71 490 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TMEM198Q66K66 360 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 OR52W1Q6IF63 320 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ENPP6Q6UWR7 440 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SLC46A3Q7Z3Q1 461 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 BANPQ8N9N5 519 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 OR4N2Q8NGD1 307 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 OR4D6Q8NGJ1 314 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF420Q8TAQ5 688 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 KCNE4Q8WWG9 221 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms