RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TPRG1Q6ZUI0 275 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 Q6ZVU0 165 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TMPRSS7Q7RTY8 843 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 OR4N4Q8N0Y3 316 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 IQCF1Q8N6M8 205 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 HCAR1Q9BXC0 346 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 FAM117AQ9C073 453 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 OR51I1Q9H343 314 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 CNTN6Q9UQ52 1028 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 EXOSC1Q9Y3B2 195 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TRBC2A0A5B9 178 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 A6NL46 340 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF705EA8MWA4 302 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 NARSO43776 548 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 CDC123O75794 336 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 RBBP9O75884 186 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ADORA3P0DMS8 318 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 CDH1P12830 882 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 NDUFV2P19404 249 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 RABIFP47224 123 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TAS2R40P59535 323 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 NR0B2Q15466 257 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 UBE2UQ5VVX9 321 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PXKQ7Z7A4 578 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TAC4Q86UU9 113 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 SLC35F5Q8WV83 523 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 IL4I1Q96RQ9 567 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 CPXM1Q96SM3 734 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ACTRT3Q9BYD9 372 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 SEMA6CQ9H3T2 930 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 RXFP3Q9NSD7 469 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 FAM198AQ9UFP1 575 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PLAGL1Q9UM63 463 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 STATHP02808 62 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 YES1P07947 543 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 RNH1P13489 461 aaKnown RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 THBS3P49746 956 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ART1P52961 327 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 CDK6Q00534 326 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 LASP1Q14847 261 aaKnown RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PTGR1Q14914 329 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF169Q14929 603 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SLC10A1Q14973 349 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 CDONQ4KMG0 1287 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 AKR1C8PQ5T2L2 129 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 C10orf62Q5T681 223 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 FAM205BPQ63HN1 556 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 TUBA3EQ6PEY2 450 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 BAIAP2L2Q6UXY1 529 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ASPGQ86U10 573 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PLD5Q8N7P1 536 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 RHBDD1Q8TEB9 315 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 DMRTB1Q96MA1 342 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 WDR92Q96MX6 357 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF681Q96N22 645 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 OR14A2Q96R54 314 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 GCM1Q9NP62 436 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ACTR10Q9NZ32 417 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 KLHL42Q9P2K6 505 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 KCNK6Q9Y257 313 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PIK3C2BO00750 1634 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 NPC1O15118 1278 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 CRYZL1O95825 349 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 MT-ND1P03886 318 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PRKCGP05129 697 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 THEGLP0DJG4 465 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 C8orf89P0DMQ9 161 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 MAGEA8P43361 318 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SEMG2Q02383 582 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 DBPQ10586 325 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 MANEAQ5SRI9 462 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 MAGI3Q5TCQ9 1506 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SLC18B1Q6NT16 456 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SLC37A3Q8NCC5 494 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 PTPRUQ92729 1446 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 TMEM203Q969S6 136 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 C12orf43Q96C57 262 aaKnown RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SLC25A44Q96H78 314 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 FAXDC2Q96IV6 333 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 MVB12BQ9H7P6 319 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 FBRSQ9HAH7 460 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SRA1Q9HD15 236 aaKnown RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 TAS2R3Q9NYW6 316 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 SH3BGRL2Q9UJC5 107 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 AIPO00170 330 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 TSPAN6O43657 245 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 MMP8P22894 467 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ALDH3B2P48448 385 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ARSFP54793 590 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 TAP2Q03519 686 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 GRB7Q14451 532 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 NSDHLQ15738 373 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 HSD17B12Q53GQ0 312 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 GPR149Q86SP6 731 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 C1orf52Q8N6N3 182 aaKnown RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF431Q8TF32 576 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 COG8Q96MW5 612 aa5.34□□□□□ -1.55
SCN1A-209ENST00000635750 VRK1Q99986 396 aaPredicted RBP5.34□□□□□ -1.55
SCN1A-209ENST00000635750 TMEM185BQ9H7F4 350 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms