RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 PGRMC2O15173 223 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 SURF4O15260 269 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 MAGEB2O15479 319 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 B4GAT1O43505 415 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 ECE2O60344 883 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 TBCAO75347 108 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 KHDRBS3O75525 346 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CRCPO75575 148 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 ATP6AP2O75787 350 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 UFL1O94874 794 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CSN3P07498 182 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 VIMP08670 466 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 SP9P0CG40 484 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 SPP1P10451 314 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 F3P13726 295 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CD1DP15813 335 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 EPCAMP16422 314 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 EIF2S2P20042 333 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 IL11P20809 199 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CTNNA2P26232 953 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 SHC1P29353 583 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 OR3A2P47893 321 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 RGS7P49802 495 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 ALDH3A2P51648 485 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 PEX3P56589 373 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CLDN17P56750 224 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 BTG1P62324 171 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CSNK2BP67870 215 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 DLK1P80370 383 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 IL10RBQ08334 325 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CD300CQ08708 224 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF177Q13360 481 aaPredicted RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 KCTD2Q14681 263 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 PSMD6Q15008 389 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 TAB1Q15750 504 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 NPTX1Q15818 432 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 PTGISQ16647 500 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 DUSP5Q16690 384 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 KYNUQ16719 465 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 MS4A18Q3C1V0 323 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 SNAI3Q3KNW1 292 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 LRRC37A5PQ49AS3 106 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CCDC184Q52MB2 194 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 ATP1A1-AS1Q5TC04 95 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 SUSD4Q5VX71 490 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CST9Q5W186 159 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF613Q6PF04 617 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 TMED8Q6PL24 325 aaPredicted RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 MOXD1Q6UVY6 613 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 PET117Q6UWS5 81 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 KIF6Q6ZMV9 814 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 MACC1Q6ZN28 852 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 Q6ZRP5 223 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 ERN2Q76MJ5 926 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CCDC186Q7Z3E2 898 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 DNAJB7Q7Z6W7 309 aaPredicted RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC25A42Q86VD7 318 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 NBPF5PQ86XG9 351 aaPredicted RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CDC20BQ86Y33 519 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 RCOR2Q8IZ40 523 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 TTC5Q8N0Z6 440 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 GPC2Q8N158 579 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 PRSS35Q8N3Z0 413 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CARNMT1Q8N4J0 409 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 FAM89BQ8N5H3 189 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 LINC00612Q8N6U2 182 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CCDC185Q8N715 623 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 LSMEM1Q8N8F7 131 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 TDRD5Q8NAT2 981 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 SMYD1Q8NB12 490 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 XXYLT1Q8NBI6 393 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 KIAA0895Q8NCT3 520 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 RHOXF1Q8NHV9 184 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CHPT1Q8WUD6 406 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CHURC1Q8WUH1 139 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 HEXDCQ8WVB3 486 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 UBLCP1Q8WVY7 318 aaPredicted RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 GTF3AQ92664 365 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 NXPE2Q96DL1 559 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 PDLIM5Q96HC4 596 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC45A3Q96JT2 553 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 SPATA17Q96L03 361 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF597Q96LX8 424 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 NSMCE3Q96MG7 304 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CFAP57Q96MR6 1250 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 ANKRD27Q96NW4 1050 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 MUS81Q96NY9 551 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 RAB3IPQ96QF0 476 aaPredicted RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 GAL3ST4Q96RP7 486 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 LGMNQ99538 433 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 NDNQ99608 321 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 MAP3K3Q99759 626 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 BAG1Q99933 345 aaPredicted RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 PKP2Q99959 881 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 MGME1Q9BQP7 344 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CHCHD5Q9BSY4 110 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 RAB11FIP5Q9BXF6 653 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 PUS3Q9BZE2 481 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 WWTR1Q9GZV5 400 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms