RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 USP54Q70EL1 1684 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CLRN2A0PK11 232 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 H0YCG3 227 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 O00370 1275 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CHUKO15111 745 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CLDN3O15551 220 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 RIPK2O43353 540 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ACSL4O60488 711 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 GRAP2O75791 330 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CXCL10P02778 98 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CHRNGP07510 517 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 HSPA5P11021 654 aaKnown RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 PRG2P13727 222 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 GOT1P17174 413 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 DNAJB1P25685 340 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 AKT2P31751 481 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 MDH1P40925 334 aaKnown RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 CETN2P41208 172 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 PITPNBP48739 271 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 TRPC1P48995 793 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 HNMTP50135 292 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 FKBP1BP68106 108 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 RELQ04864 619 aaPredicted RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 ELP6Q0PNE2 266 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 TAF10Q12962 218 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 GIT2Q14161 759 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ITPRIPL2Q3MIP1 535 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ZNF542PQ5EBM4 170 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 LDLRAP1Q5SW96 308 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CES4AQ5XG92 561 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ZNF770Q6IQ21 691 aaPredicted RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 KLHL10Q6JEL2 608 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 SLC25A24Q6NUK1 477 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 UGT3A1Q6NUS8 523 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CD164L2Q6UWJ8 174 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ARSKQ6UWY0 536 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 PIWIL4Q7Z3Z4 852 aaKnown RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 ZNF554Q86TJ5 538 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 RTN4RL2Q86UN3 420 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ZNF444Q8N0Y2 327 aaPredicted RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 KLHDC1Q8N7A1 406 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 OR56B1Q8NGI3 324 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 OR1J1Q8NGS3 322 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 SELENOMQ8WWX9 145 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 SHC3Q92529 594 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ARHGAP45Q92619 1136 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ESAMQ96AP7 390 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ANKRD9Q96BM1 317 aaPredicted RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 FBXO17Q96EF6 278 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 NSL1Q96IY1 281 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 MAP3K3Q99759 626 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 SSX3Q99909 188 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 RTP3Q9BQQ7 232 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ALKBH7Q9BT30 221 aaPredicted RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 LRRC2Q9BYS8 371 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CSTL1Q9H114 145 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 DPEP2Q9H4A9 486 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 TMEM231Q9H6L2 316 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 TLE6Q9H808 572 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 DCLRE1BQ9H816 532 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 C10orf88Q9H8K7 445 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 APOBEC3GQ9HC16 384 aaKnown RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 A4GALTQ9NPC4 353 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 FAM207AQ9NSI2 230 aaPredicted RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 CENPMQ9NSP4 180 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 FAM212BQ9NTI7 297 aaPredicted RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.9□□□□□ -1.95
VPS8-228ENST00000628962 TMOD2Q9NZR1 351 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CLIP2Q9UDT6 1046 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 FAM153AQ9UHL3 310 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CTNNA3Q9UI47 895 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 LAMP5Q9UJQ1 280 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 NCKAP1Q9Y2A7 1128 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 TMED7Q9Y3B3 224 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 ANGPTL3Q9Y5C1 460 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 PPIP5K1Q6PFW1 1433 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 YTHDC2Q9H6S0 1430 aaKnown RBP2.9□□□□□ -1.95
VPS8-228ENST00000628962 UBE4BO95155 1302 aa2.9□□□□□ -1.95
VPS8-228ENST00000628962 CUL9Q8IWT3 2517 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 NUP155O75694 1391 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 ANKRD36BQ8N2N9 1353 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 UNC80Q8N2C7 3258 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 KIF13BQ9NQT8 1826 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 A0A087WZY1 265 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 CCDC162PA2VCL2 907 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 C5orf60A6NFR6 353 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 C2orf81A6NN90 581 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 GPR89AB7ZAQ6 455 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 F8WDY8 70 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 M0R296 226 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 ANGPT2O15123 496 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 SLC22A2O15244 555 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 STBD1O95210 358 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 PMS2P2O95744 297 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 SFTPBP07988 381 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 NUDT17P0C025 328 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 GPR89BP0CG08 455 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 F3P13726 295 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 EZRP15311 586 aaKnown RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 DGKAP23743 735 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms