RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 DOCK4Q8N1I0 1966 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 DYTNA2CJ06 578 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 PRMT3O60678 531 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 ATE1O95260 518 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 KRT75O95678 551 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 NOS3P29474 1203 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 CCR3P51677 355 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 NCS1P62166 190 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 FOXM1Q08050 763 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 SP140Q13342 867 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 C6orf141Q5SZD1 244 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 FCRLBQ6BAA4 426 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 HACD2Q6Y1H2 254 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 DCP2Q8IU60 420 aaKnown RBP7.15□□□□□ -1.26
PKP4-217ENST00000628904 GALNT15Q8N3T1 639 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 ANKRD53Q8N9V6 530 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 OR5M3Q8NGP4 307 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 GPR151Q8TDV0 419 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 DACT3Q96B18 629 aaPredicted RBP7.15□□□□□ -1.26
PKP4-217ENST00000628904 RGMAQ96B86 450 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 ISOC1Q96CN7 298 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 CPPED1Q9BRF8 314 aaPredicted RBP7.15□□□□□ -1.26
PKP4-217ENST00000628904 COPS4Q9BT78 406 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 OR51I1Q9H343 314 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 NTN4Q9HB63 628 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 USE1Q9NZ43 259 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 ZNF282Q9UDV7 671 aaPredicted RBP7.15□□□□□ -1.26
PKP4-217ENST00000628904 NTNG1Q9Y2I2 539 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 N6AMT1Q9Y5N5 214 aa7.15□□□□□ -1.26
PKP4-217ENST00000628904 ARHGEF17Q96PE2 2063 aaPredicted RBP7.15□□□□□ -1.27
PKP4-217ENST00000628904 HAT1O14929 419 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 VILLO15195 856 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 CELA2BP08218 269 aaPredicted RBP7.15□□□□□ -1.27
PKP4-217ENST00000628904 STSP08842 583 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 COL9A1P20849 921 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 MATN1P21941 496 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 PTPN5P54829 565 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 PPP1CAP62136 330 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 HYAL1Q12794 435 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 SFSWAPQ12872 951 aaKnown RBP7.15□□□□□ -1.27
PKP4-217ENST00000628904 FGL2Q14314 439 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 EIF4HQ15056 248 aaKnown RBP7.15□□□□□ -1.27
PKP4-217ENST00000628904 ANKDD1AQ495B1 522 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 SLC36A3Q495N2 470 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 PIP5KL1Q5T9C9 394 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 RNF44Q7L0R7 432 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 SLCO6A1Q86UG4 719 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 AMIGO1Q86WK6 493 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 ZCCHC7Q8N3Z6 543 aaKnown RBP7.15□□□□□ -1.27
PKP4-217ENST00000628904 WDR36Q8NI36 951 aaKnown RBP7.15□□□□□ -1.27
PKP4-217ENST00000628904 THAP3Q8WTV1 239 aaPredicted RBP7.15□□□□□ -1.27
PKP4-217ENST00000628904 OR1E3Q8WZA6 343 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 NCSTNQ92542 709 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 LRIG1Q96JA1 1093 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 SLC35G5Q96KT7 338 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 RIPOR3Q96MK2 946 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 SERHLQ9NQF3 203 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 FAM120CQ9NX05 1096 aaKnown RBP7.15□□□□□ -1.27
PKP4-217ENST00000628904 KCMF1Q9P0J7 381 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 HCN3Q9P1Z3 774 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 ATG4BQ9Y4P1 393 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 ST14Q9Y5Y6 855 aa7.15□□□□□ -1.27
PKP4-217ENST00000628904 TLX2O43763 284 aaPredicted RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 AHCYL1O43865 530 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 NDUFS2O75306 463 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 UGT2B17O75795 530 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 MT-ND2P03891 347 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 ALPLP05186 524 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 HMGN2P05204 90 aaKnown RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 PABPC4LP0CB38 370 aaKnown RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 GKN3PP0CG01 181 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 PRR35P0CG20 571 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 CMPK1P30085 196 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 CTHP32929 405 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 ZFP36L2P47974 494 aaKnown RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 ATAD3BQ5T9A4 648 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 CWF19L1Q69YN2 538 aaKnown RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 CDC73Q6P1J9 531 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 SIMC1Q8NDZ2 872 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 ZBED6CLQ96FA7 236 aaPredicted RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 AHCYL2Q96HN2 611 aaKnown RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 ALPK1Q96QP1 1244 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 NIPSNAP1Q9BPW8 284 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 FAIM2Q9BWQ8 316 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 CNIH4Q9P003 139 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 ZFR2Q9UPR6 939 aaKnown RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 TPRKBQ9Y3C4 175 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 CCL27Q9Y4X3 112 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 ACOX3O15254 700 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 CAPN5O15484 640 aaPredicted RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 PRSS23O95084 383 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 SLC35G6P0C7Q6 338 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 CD247P20963 164 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 DNAJA1P31689 397 aaKnown RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 RAB28P51157 221 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 DAPP51397 102 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 RGS8P57771 180 aaPredicted RBP7.14□□□□□ -1.27
PKP4-217ENST00000628904 FOXL2P58012 376 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 TAS2R38P59533 333 aa7.14□□□□□ -1.27
PKP4-217ENST00000628904 MAT1AQ00266 395 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms