RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 OR2L2Q8NH16 312 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 THRSPQ92748 146 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 BADQ92934 168 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 MUS81Q96NY9 551 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCN8A-209ENST00000627620 PCDHB16Q9NRJ7 776 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 NUDT15Q9NV35 164 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 BACE2Q9Y5Z0 518 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 ALG5Q9Y673 324 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 UNC119BA6NIH7 251 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 FESP07332 822 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 SOX2P48431 317 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 MAN2A2P49641 1150 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 ALG10Q5BKT4 473 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 CDHR3Q6ZTQ4 885 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 RDH12Q96NR8 316 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 LIN28AQ9H9Z2 209 aaKnown RBP12.29□□□□□ -0.44
SCN8A-209ENST00000627620 IL23AQ9NPF7 189 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 AIG1Q9NVV5 245 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 ZFR2Q9UPR6 939 aaKnown RBP12.29□□□□□ -0.44
SCN8A-209ENST00000627620 PHLPP1O60346 1717 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 DISC1C4P0D8 188 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 C6P13671 934 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 FBLP22087 321 aaKnown RBP12.29□□□□□ -0.44
SCN8A-209ENST00000627620 FDXRP22570 491 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 KCNAB2Q13303 367 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 HMGN2P46Q86SG4 172 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 LRRC25Q8N386 305 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-209ENST00000627620 OR2T33Q8NG76 320 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 SARDHQ9UL12 918 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 WASF3Q9UPY6 502 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 RFPL2O75678 378 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 FARS2O95363 451 aaKnown RBP12.28□□□□□ -0.44
SCN8A-209ENST00000627620 SNAP29O95721 258 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 LATS1O95835 1130 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 IFNA7P01567 189 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF806P0C7X5 589 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 JUNDP17535 347 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 S1PR1P21453 382 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 HTR1EP28566 365 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 PLCXD2Q0VAA5 305 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 HNRNPA0Q13151 305 aaKnown RBP12.28□□□□□ -0.44
SCN8A-209ENST00000627620 CCINQ13939 588 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 CNIH3Q8TBE1 160 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 LRRC20Q8TCA0 184 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 THAP3Q8WTV1 239 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-209ENST00000627620 HDAC2Q92769 488 aaKnown RBP12.28□□□□□ -0.44
SCN8A-209ENST00000627620 TESCQ96BS2 214 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 SLC2A11Q9BYW1 496 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 DEFB126Q9BYW3 111 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 ABCD2Q9UBJ2 740 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 LIPT1Q9Y234 373 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 MYADML2A6NDP7 307 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 SYNGR4O95473 234 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 NIPAL4Q0D2K0 466 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 EIF4HQ15056 248 aaKnown RBP12.28□□□□□ -0.44
SCN8A-209ENST00000627620 C1orf220Q5T0J3 134 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 CES4AQ5XG92 561 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 NXPE4Q6UWF7 544 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 CSNK1A1LQ8N752 337 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 OR51A7Q8NH64 312 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF675Q8TD23 568 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 ARHGAP39Q9C0H5 1083 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 TSPAN4O14817 238 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF865P0CJ78 1059 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-209ENST00000627620 PLEKHG7Q6ZR37 379 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 UBE2Q1Q7Z7E8 422 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 OR5T2Q8NGG2 359 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 HPF1Q9NWY4 346 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 EEDO75530 441 aaKnown RBP12.28□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF16P17020 682 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-209ENST00000627620 STOMP27105 288 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 ARSDP51689 593 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 RPS15AP62244 130 aaKnown RBP12.28□□□□□ -0.44
SCN8A-209ENST00000627620 PHC1P78364 1004 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 PLP2Q04941 152 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 C15orf39Q6ZRI6 1047 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 KCTD9Q7L273 389 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 TMEM9Q9P0T7 183 aa12.28□□□□□ -0.44
SCN8A-209ENST00000627620 NPIPA2E9PIF3 369 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 NPIPA3F8WFD2 350 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 DUX1O43812 170 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 CELP19835 753 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 MPP2Q14168 576 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 GAS6Q14393 721 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF542PQ5EBM4 170 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 RNF111Q6ZNA4 994 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 TTLL10Q6ZVT0 673 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 GALNT10Q86SR1 603 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 TSACCQ96A04 125 aaPredicted RBP12.27□□□□□ -0.44
SCN8A-209ENST00000627620 DNAJA3Q96EY1 480 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 SH2B3Q9UQQ2 575 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 A0A1W2PPW3 197 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 H0YAE9 185 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 CCRL2O00421 344 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 DLGAP1O14490 977 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 VNN2O95498 520 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 YES1P07947 543 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 HOXA11P31270 313 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms