RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 THAP11Q96EK4 314 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 TMEM121BQ9BXQ6 578 aaPredicted RBP20.92■□□□□ 0.94
PNKP-220ENST00000627232 RBM38Q9H0Z9 239 aaKnown RBP20.92■□□□□ 0.94
PNKP-220ENST00000627232 POT1Q9NUX5 634 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 KLHL20Q9Y2M5 609 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 TRBV23OR9-2A0A075B6M9 112 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 LOC100130705A0A1B0GUX0 176 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 DIRAS1O95057 198 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 VIPP01282 170 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 ITGA2P17301 1181 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 IGFBP5P24593 272 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 CD6P30203 668 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 CCT3P49368 545 aaKnown RBP20.91■□□□□ 0.94
PNKP-220ENST00000627232 CDK9P50750 372 aaKnown RBP20.91■□□□□ 0.94
PNKP-220ENST00000627232 RELAQ04206 551 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 ANKRD34AQ69YU3 496 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 FAM180BQ6P0A1 224 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 VN1R4Q7Z5H5 301 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 ASPGQ86U10 573 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 ARMC8Q8IUR7 673 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 ZNF687Q8N1G0 1237 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 HORMAD2Q8N7B1 307 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 AMDHD1Q96NU7 426 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 MACROD1Q9BQ69 325 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 GLIPR2Q9H4G4 154 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 ZNF451Q9Y4E5 1061 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 KLK4Q9Y5K2 254 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 ENTPD2Q9Y5L3 495 aa20.91■□□□□ 0.94
PNKP-220ENST00000627232 KIR2DS5A0A0G2JLQ3 304 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 A0A0G2JNG1 304 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 SPTY2D1-AS1A0A0U1RR47 76 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 A0A1W2PR48 441 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 KIR2DS3K7RE56 304 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 ADAMDEC1O15204 470 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 UGT2B11O75310 529 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 OR6B1O95007 311 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 STATHP02808 62 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 UGT2B7P16662 529 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 CDH2P19022 906 aaPredicted RBP20.9■□□□□ 0.94
PNKP-220ENST00000627232 DAPP51397 102 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 CDH15P55291 814 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 EIF2B5Q13144 721 aaKnown RBP20.9■□□□□ 0.94
PNKP-220ENST00000627232 GPR18Q14330 331 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 KIR2DS5Q14953 304 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 RBM48Q5RL73 367 aaKnown RBP20.9■□□□□ 0.94
PNKP-220ENST00000627232 TMEM64Q6YI46 380 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 RBM44Q6ZP01 1051 aaKnown RBP20.9■□□□□ 0.94
PNKP-220ENST00000627232 CYP4Z1Q86W10 505 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 PIK3C3Q8NEB9 887 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 SPPL2AQ8TCT8 520 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 SFXN5Q8TD22 340 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 GEMIN6Q8WXD5 167 aaKnown RBP20.9■□□□□ 0.94
PNKP-220ENST00000627232 HDAC2Q92769 488 aaKnown RBP20.9■□□□□ 0.94
PNKP-220ENST00000627232 UCN3Q969E3 161 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 TM4SF19Q96DZ7 209 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 BBS4Q96RK4 519 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 GPR174Q9BXC1 333 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 ROGDIQ9GZN7 287 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 ING2Q9H160 280 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 SYNPO2LQ9H987 977 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 DDX18Q9NVP1 670 aaKnown RBP20.9■□□□□ 0.94
PNKP-220ENST00000627232 ACTR10Q9NZ32 417 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 PDP1Q9P0J1 537 aaPredicted RBP20.9■□□□□ 0.94
PNKP-220ENST00000627232 THEGQ9P2T0 379 aa20.9■□□□□ 0.94
PNKP-220ENST00000627232 C5orf58C9J3I9 102 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 ZNF217O75362 1048 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 JRKO75564 520 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 OPN1SWP03999 348 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 PIGAP37287 484 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 HLCSP50747 726 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 TPD52P55327 224 aaPredicted RBP20.89■□□□□ 0.94
PNKP-220ENST00000627232 UBE2IP63279 158 aaKnown RBP20.89■□□□□ 0.94
PNKP-220ENST00000627232 SMAD2Q15796 467 aaKnown RBP20.89■□□□□ 0.94
PNKP-220ENST00000627232 FBXO42Q6P3S6 717 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 FAHD1Q6P587 224 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 TSEN54Q7Z6J9 526 aaKnown RBP20.89■□□□□ 0.94
PNKP-220ENST00000627232 TSTD1Q8NFU3 115 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 BARD1Q99728 777 aaKnown RBP20.89■□□□□ 0.94
PNKP-220ENST00000627232 RUBCNLQ9H714 662 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 NDUFAF4Q9P032 175 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 CPNE7Q9UBL6 633 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 ATG4BQ9Y4P1 393 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 SNX11Q9Y5W9 270 aa20.89■□□□□ 0.94
PNKP-220ENST00000627232 A0A1W2PPC4 97 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 B4GALT2O60909 372 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 PDE9AO76083 593 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 AIFM1O95831 613 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 TFPTP0C1Z6 253 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 THEGLP0DJG4 465 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 CERS1P27544 350 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 RYKP34925 604 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 TOP3AQ13472 1001 aaPredicted RBP20.88■□□□□ 0.93
PNKP-220ENST00000627232 FZD2Q14332 565 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 ZNF691Q5VV52 312 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 SLC48A1Q6P1K1 146 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 MOAP1Q96BY2 351 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 ZNF300Q96RE9 604 aaPredicted RBP20.88■□□□□ 0.93
PNKP-220ENST00000627232 LMAN1LQ9HAT1 526 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 SEMA3GQ9NS98 782 aa20.88■□□□□ 0.93
PNKP-220ENST00000627232 CES1P1Q9UKY3 287 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms