RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 OPN5Q6U736 354 aa17.55■□□□□ 0.4
SMN1-211ENST00000625245 GOLM1Q8NBJ4 401 aa17.55■□□□□ 0.4
SMN1-211ENST00000625245 KCNC2Q96PR1 638 aa17.55■□□□□ 0.4
SMN1-211ENST00000625245 EHD1Q9H4M9 534 aa17.55■□□□□ 0.4
SMN1-211ENST00000625245 POPDC3Q9HBV1 291 aa17.55■□□□□ 0.4
SMN1-211ENST00000625245 LYRM4Q9HD34 91 aa17.55■□□□□ 0.4
SMN1-211ENST00000625245 NSMCE4AQ9NXX6 385 aa17.55■□□□□ 0.4
SMN1-211ENST00000625245 TUBA8Q9NY65 449 aaPredicted RBP17.55■□□□□ 0.4
SMN1-211ENST00000625245 CD274Q9NZQ7 290 aa17.55■□□□□ 0.4
SMN1-211ENST00000625245 COPS7AQ9UBW8 275 aa17.55■□□□□ 0.4
SMN1-211ENST00000625245 MTO1Q9Y2Z2 717 aaKnown RBP17.55■□□□□ 0.4
SMN1-211ENST00000625245 SPACA6W5XKT8 324 aa17.55■□□□□ 0.4
SMN1-211ENST00000625245 AKAP6Q13023 2319 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 A0A0G2JNJ9 132 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 RTCAO00442 366 aaKnown RBP17.54■□□□□ 0.4
SMN1-211ENST00000625245 PHGDHO43175 533 aaKnown RBP17.54■□□□□ 0.4
SMN1-211ENST00000625245 NADKO95544 446 aaPredicted RBP17.54■□□□□ 0.4
SMN1-211ENST00000625245 ETHE1O95571 254 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 CCDC166P0CW27 439 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 CCL3P10147 92 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 GGT5P36269 586 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 MSH2P43246 934 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 POU4F1Q01851 419 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 IRF8Q02556 426 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 ASPHQ12797 758 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 LAPTM5Q13571 262 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 PDK4Q16654 411 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 PAGE2BQ5JRK9 111 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 RTL6Q6ICC9 239 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 SULT1C3Q6IMI6 304 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 ZNF793Q6ZN11 406 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 SRFBP1Q8NEF9 429 aaKnown RBP17.54■□□□□ 0.4
SMN1-211ENST00000625245 OR8K3Q8NH51 312 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 EXT2Q93063 718 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 EFCAB11Q9BUY7 163 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 ROGDIQ9GZN7 287 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 SLC24A3Q9HC58 644 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 SEMA4BQ9NPR2 832 aaPredicted RBP17.54■□□□□ 0.4
SMN1-211ENST00000625245 TRMT1Q9NXH9 659 aaKnown RBP17.54■□□□□ 0.4
SMN1-211ENST00000625245 Q9UFV3 132 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 FAM215AQ9Y5M1 114 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 FREM3P0C091 2139 aa17.54■□□□□ 0.4
SMN1-211ENST00000625245 A0A1B0GVC2 190 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 AQP7O14520 342 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 ZSCAN12O43309 604 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 CCNT2O60583 730 aaKnown RBP17.53■□□□□ 0.4
SMN1-211ENST00000625245 SEC31AO94979 1220 aaKnown RBP17.53■□□□□ 0.4
SMN1-211ENST00000625245 TCP1P17987 556 aaKnown RBP17.53■□□□□ 0.4
SMN1-211ENST00000625245 CD22P20273 847 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 CPN2P22792 545 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 ATP5A1P25705 553 aaKnown RBP17.53■□□□□ 0.4
SMN1-211ENST00000625245 DNAJA1P31689 397 aaKnown RBP17.53■□□□□ 0.4
SMN1-211ENST00000625245 PIGAP37287 484 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 CHIT1Q13231 466 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 OR4D1Q15615 310 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 AP5B1Q2VPB7 878 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 WLSQ5T9L3 541 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 UBE3DQ7Z6J8 389 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 LIX1LQ8IVB5 337 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 OR4N5Q8IXE1 308 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 ZBED8Q8IZ13 594 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 ACOT4Q8N9L9 421 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 ZNF721Q8TF20 911 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 ANKRD9Q96BM1 317 aaPredicted RBP17.53■□□□□ 0.4
SMN1-211ENST00000625245 SARAFQ96BY9 339 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 WDR34Q96EX3 536 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 TSPAN17Q96FV3 270 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 KRT12Q99456 494 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 TBCDQ9BTW9 1192 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 CNPPD1Q9BV87 410 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 SMYD2Q9NRG4 433 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 PRRC2AP48634 2157 aaKnown RBP17.53■□□□□ 0.4
SMN1-211ENST00000625245 ARHGAP21Q5T5U3 1957 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 NCKAP5O14513 1909 aa17.53■□□□□ 0.4
SMN1-211ENST00000625245 SAP18O00422 153 aaKnown RBP17.52■□□□□ 0.4
SMN1-211ENST00000625245 SUSD5O60279 629 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 WDR1O75083 606 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 TGFB1P01137 390 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 S100BP04271 92 aaPredicted RBP17.52■□□□□ 0.4
SMN1-211ENST00000625245 PCNAP12004 261 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 COX7A2P14406 83 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 ADH7P40394 386 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 IST1P53990 364 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 DLX5P56178 289 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 FOXO1Q12778 655 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 PIGGQ5H8A4 983 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 CDKL4Q5MAI5 379 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 C1orf185Q5T7R7 199 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 WDR53Q7Z5U6 358 aaPredicted RBP17.52■□□□□ 0.4
SMN1-211ENST00000625245 MYRIPQ8NFW9 859 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 DGAT2Q96PD7 388 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 MS4A8Q9BY19 250 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 DNAJB12Q9NXW2 375 aaKnown RBP17.52■□□□□ 0.4
SMN1-211ENST00000625245 TXNDC16Q9P2K2 825 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 ATG4BQ9Y4P1 393 aa17.52■□□□□ 0.4
SMN1-211ENST00000625245 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.52■□□□□ 0.4
SMN1-211ENST00000625245 ITPR3Q14573 2671 aa17.52■□□□□ 0.39
SMN1-211ENST00000625245 TRGV5A0A0B4J1U4 118 aa17.51■□□□□ 0.39
SMN1-211ENST00000625245 EFCAB8A8MWE9 144 aa17.51■□□□□ 0.39
SMN1-211ENST00000625245 WISP3O95389 354 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms