RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 ARHGAP19Q14CB8 494 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 VITQ6UXI7 678 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 C6orf120Q7Z4R8 191 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 ZNF605Q86T29 641 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 AQP11Q8NBQ7 271 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 DYNC2LI1Q8TCX1 351 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 NEURL3Q96EH8 262 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 TMEM19Q96HH6 336 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 COX4I2Q96KJ9 171 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 ALPK1Q96QP1 1244 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 MACROD1Q9BQ69 325 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 PELI2Q9HAT8 420 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 PALMDQ9NP74 551 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 TBCCD1Q9NVR7 557 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 C5orf58C9J3I9 102 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 SCAMP1O15126 338 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 MRPS14O60783 128 aaKnown RBP11.38□□□□□ -0.59
TP53-227ENST00000622645 SEMA7AO75326 666 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 CCNB2O95067 398 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 RPN2P04844 631 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 STSP08842 583 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 OCM2P0CE71 109 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 OCMP0CE72 109 aaPredicted RBP11.38□□□□□ -0.59
TP53-227ENST00000622645 GABRB1P18505 474 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 CXCR2P25025 360 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 HMGA2P52926 109 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 RUNX3Q13761 415 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 PTGES3Q15185 160 aaKnown RBP11.38□□□□□ -0.59
TP53-227ENST00000622645 MLF2Q15773 248 aaPredicted RBP11.38□□□□□ -0.59
TP53-227ENST00000622645 UBE2UQ5VVX9 321 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 SAXO2Q658L1 398 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 UBE3DQ7Z6J8 389 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 KIAA1958Q8N8K9 716 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 OR5P2Q8WZ92 322 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 C12orf66Q96MD2 445 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 FERD3LQ96RJ6 166 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 INSM2Q96T92 566 aaPredicted RBP11.38□□□□□ -0.59
TP53-227ENST00000622645 BCL7BQ9BQE9 202 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 ITPAQ9BY32 194 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 SIRT3Q9NTG7 399 aaPredicted RBP11.38□□□□□ -0.59
TP53-227ENST00000622645 WBP1LQ9NX94 342 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 KCNK6Q9Y257 313 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 ERGIC3Q9Y282 383 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 NUP210Q8TEM1 1887 aaPredicted RBP11.38□□□□□ -0.59
TP53-227ENST00000622645 A0A1W2PP55 124 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 M0R082 166 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 SULT1C4O75897 302 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 RHCEP18577 417 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 PTGER1P34995 402 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 CTSKP43235 329 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 REEP5Q00765 189 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 FGL2Q14314 439 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 CST6Q15828 149 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 DGUOKQ16854 277 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 LEXMQ3ZCV2 418 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 SPDYE7PQ495Y7 208 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 FAM46CQ5VWP2 391 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 PAGE2Q7Z2X7 111 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 SZRD1Q7Z422 152 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 ADCK1Q86TW2 530 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 GPR32P1Q8NGA4 272 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 PPP1R14BQ96C90 147 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 WFDC6Q9BQY6 131 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 WDR26Q9H7D7 661 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 AKIP1Q9NQ31 210 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 PLCXD1Q9NUJ7 323 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 IMP3Q9NV31 184 aaKnown RBP11.37□□□□□ -0.59
TP53-227ENST00000622645 IMPAD1Q9NX62 359 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 CHCHD3Q9NX63 227 aaKnown RBP11.37□□□□□ -0.59
TP53-227ENST00000622645 DOLKQ9UPQ8 538 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 PLEKHM1Q9Y4G2 1056 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 STON1Q9Y6Q2 735 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 TRANK1O15050 2925 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 NINQ8N4C6 2090 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 CCDC88CQ9P219 2028 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 IGKV1-8A0A0C4DH67 115 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 TRBV4-1A0A0J9YWV2 114 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 EFCAB9A8MZ26 197 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 KMOO15229 486 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 NDUFS4O43181 175 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 PRKRAO75569 313 aaKnown RBP11.37□□□□□ -0.59
TP53-227ENST00000622645 CDK1P06493 297 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 CBLP22681 906 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 POU1F1P28069 291 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 PCBP4P57723 403 aaKnown RBP11.37□□□□□ -0.59
TP53-227ENST00000622645 CSNK1G2P78368 415 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 TP53BP2Q13625 1128 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 ZNF846Q147U1 533 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 IRF4Q15306 451 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 MAPK11Q15759 364 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 RGS21Q2M5E4 152 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 KLHL17Q6TDP4 642 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 NUDT13Q86X67 352 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 RBM45Q8IUH3 476 aaKnown RBP11.37□□□□□ -0.59
TP53-227ENST00000622645 TAGAPQ8N103 731 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 HDDC3Q8N4P3 179 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 APOBEC4Q8WW27 367 aaKnown RBP11.37□□□□□ -0.59
TP53-227ENST00000622645 MYDGFQ969H8 173 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 VMP1Q96GC9 406 aa11.37□□□□□ -0.59
TP53-227ENST00000622645 TEFMQ96QE5 360 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms