RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 IGLON5A6NGN9 336 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 EFCAB9A8MZ26 197 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 KMOO15229 486 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 MPZL2O60487 215 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 TRIM23P36406 574 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 LIM2P55344 173 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 TRA2BP62995 288 aaKnown RBP8.96□□□□□ -0.97
PDPN-212ENST00000621990 ENPP2Q13822 863 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 CYP27C1Q4G0S4 372 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 COLEC12Q5KU26 742 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 NIPAL1Q6NVV3 410 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 KLHL17Q6TDP4 642 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 NUDT13Q86X67 352 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 C12orf76Q8N812 135 aaPredicted RBP8.96□□□□□ -0.97
PDPN-212ENST00000621990 LINC01555Q8NAE3 123 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 GPR32P1Q8NGA4 272 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 RPL3LQ92901 407 aaKnown RBP8.96□□□□□ -0.97
PDPN-212ENST00000621990 FGF13Q92913 245 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 COL21A1Q96P44 957 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 ALPK1Q96QP1 1244 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 NRTNQ99748 197 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 MROQ9BYG7 248 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 ABCG4Q9H172 646 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 NDOR1Q9UHB4 597 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 ACAD8Q9UKU7 415 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 FAM32AQ9Y421 112 aaKnown RBP8.96□□□□□ -0.97
PDPN-212ENST00000621990 A3GALT2U3KPV4 340 aa8.96□□□□□ -0.97
PDPN-212ENST00000621990 PRR19A6NJB7 356 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 RTCAO00442 366 aaKnown RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 HMGN4O00479 90 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 TMPRSS11DO60235 418 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 SEMA7AO75326 666 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 FUCA1P04066 466 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 PCCBP05166 539 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 EPHX1P07099 455 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 ALDH4A1P30038 563 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 MANFP55145 182 aaKnown RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 LSM3P62310 102 aaKnown RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 ITGADQ13349 1161 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 PTGES3Q15185 160 aaKnown RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 TIGD6Q17RP2 521 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 TMC5Q6UXY8 1006 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 SLC46A3Q7Z3Q1 461 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 ADGRD2Q7Z7M1 963 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 AQP11Q8NBQ7 271 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 CREB3L4Q8TEY5 395 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 RGMAQ96B86 450 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 CHFRQ96EP1 664 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 TMEM19Q96HH6 336 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 CDCA4Q9BXL8 241 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 RSPH9Q9H1X1 276 aaPredicted RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 GIN1Q9NXP7 522 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 GDE1Q9NZC3 331 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 CNOT2Q9NZN8 540 aaKnown RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 SNX8Q9Y5X2 465 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 HEATR5BQ9P2D3 2071 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 REV3LO60673 3130 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 TRPM6Q9BX84 2022 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 A0A0A6YYD5 115 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 FUOMA2VDF0 154 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 TBC1D3BA6NDS4 549 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 TOR1BO14657 336 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 NDUFS4O43181 175 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 CLEC3AO75596 197 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 PDE9AO76083 593 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 ADAP00813 363 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 GASTP01350 101 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 SLC35G4P0C7Q5 338 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 ADORA3P0DMS8 318 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 BMP4P12644 408 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 CHMP24386 653 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 PSMB5P28074 263 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 MAGEA8P43361 318 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 SLC15A1P46059 708 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 GSSP48637 474 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 IDH2P48735 452 aaKnown RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 CYP4F2P78329 520 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 TOR1AIP1Q5JTV8 583 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 FAM92BQ6ZTR7 304 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 C6orf120Q7Z4R8 191 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 MINDY2Q8NBR6 621 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 ZBED6CLQ96FA7 236 aaPredicted RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 FUZQ9BT04 418 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 NXF2Q9GZY0 626 aaKnown RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 NMNAT1Q9HAN9 279 aaPredicted RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 FZD3Q9NPG1 666 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 GPR83Q9NYM4 423 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 EHD3Q9NZN3 535 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 SELENONQ9NZV5 590 aa8.96□□□□□ -0.98
PDPN-212ENST00000621990 CFAP20Q9Y6A4 193 aaKnown RBP8.96□□□□□ -0.98
PDPN-212ENST00000621990 IGKV1-8A0A0C4DH67 115 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 FEZF1A0PJY2 475 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 ANTXRLA6NF34 631 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 H7BY64 318 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 KPNA4O00629 521 aaPredicted RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 OXSR1O95747 527 aaPredicted RBP8.95□□□□□ -0.98
PDPN-212ENST00000621990 BCHEP06276 602 aa8.95□□□□□ -0.98
PDPN-212ENST00000621990 HNRNPCP07910 306 aaKnown RBP eCLIP8.95□□□□□ -0.98
PDPN-212ENST00000621990 PIPP12273 146 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms