RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 C4orf17Q53FE4 359 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 HSP90B2PQ58FF3 399 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 OR4C11Q6IEV9 310 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 GTF2H2CQ6P1K8 395 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 ZNF227Q86WZ6 799 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 ARMC10Q8N2F6 343 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 PTGR2Q8N8N7 351 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 CCDC63Q8NA47 563 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 THAP3Q8WTV1 239 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 PGM2Q96G03 612 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 MTERF1Q99551 399 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 IPPKQ9H8X2 491 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 ACTR8Q9H981 624 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 ADAP2Q9NPF8 381 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 ADGRE2Q9UHX3 823 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 GRID1Q9ULK0 1009 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 RNF11Q9Y3C5 154 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 TNPO3Q9Y5L0 923 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 A0A1W2PPM1 405 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 LDB3O75112 727 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 SMIM24O75264 130 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 SCELO95171 688 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 SP1P08047 785 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 STSP08842 583 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 CD46P15529 392 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 TAC1P20366 129 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 PIK3CBP42338 1070 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 SSR2P43308 183 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 CPSF6Q16630 551 aaKnown RBP eCLIP16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 SLC25A25Q6KCM7 469 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 GFRALQ6UXV0 394 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 GALNTL5Q7Z4T8 443 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 NCLNQ969V3 563 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 PHF21BQ96EK2 531 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 VMP1Q96GC9 406 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 ALOXE3Q9BYJ1 711 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 TRIM45Q9H8W5 580 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 DMRT3Q9NQL9 472 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 VTI1BQ9UEU0 232 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 MID2Q9UJV3 735 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 FBXW2Q9UKT8 454 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 TMCO1Q9UM00 188 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 TSC22D4Q9Y3Q8 395 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 PCDHGA11Q9Y5H2 935 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 CROCCQ5TZA2 2017 aa16.74■□□□□ 0.27
SCAMP4-213ENST00000621748 H0YIV9 168 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 PLPP1O14494 284 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 CDK2AP1O14519 115 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 OR7A17O14581 309 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 PRKNO60260 465 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 UGDHO60701 494 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 UNC5CO95185 931 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 CLDN1O95832 211 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 IFNA16P05015 189 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 EEF1DP29692 281 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 TRHRP34981 398 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 CYB561P49447 251 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 HLCSP50747 726 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 RPS13P62277 151 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 STX4Q12846 297 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 SLAMF1Q13291 335 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 ELAVL1Q15717 326 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 METTL2BQ6P1Q9 378 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 TRABD2AQ86V40 505 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 C4orf33Q8N1A6 199 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 TMEM132CQ8N3T6 1108 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 HORMAD2Q8N7B1 307 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 L3MBTL4Q8NA19 623 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 TMEM178AQ8NBL3 297 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 PTPMT1Q8WUK0 201 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 SREK1Q8WXA9 508 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 RGMAQ96B86 450 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 ANKRD9Q96BM1 317 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 ZBTB9Q96C00 473 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 CDK15Q96Q40 435 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 NOL11Q9H8H0 719 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 XPR1Q9UBH6 696 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 SEC14L3Q9UDX4 400 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 GTF3C1Q12789 2109 aa16.73■□□□□ 0.27
SCAMP4-213ENST00000621748 ASPDHA6ND91 283 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 TMEM200CA6NKL6 621 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 FCHO1O14526 889 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 ATP8B1O43520 1251 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 SLC25A12O75746 678 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 ETHE1O95571 254 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 CPN2P22792 545 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 PIK3CGP48736 1102 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 NEK2P51955 445 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 ID2Q02363 134 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 MAPKAPK3Q16644 382 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 CCDC153Q494R4 210 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 C1QL3Q5VWW1 255 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 C16orf47Q6ZP98 133 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 TMEM151AQ8N4L1 468 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 OR52B6Q8NGF0 335 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 WDR20Q8TBZ3 569 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 FRMD6Q96NE9 622 aa16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 NSUN5Q96P11 429 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-213ENST00000621748 MRPL57Q9BQC6 102 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms