RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 HPP00738 406 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 CELA2AP08217 269 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 LINC00032P0C843 101 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 SOX8P57073 446 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 BTKQ06187 659 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 STX3Q13277 289 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 SFT2D3Q587I9 215 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 PAGE2Q7Z2X7 111 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 MMP21Q8N119 569 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 METTL21AQ8WXB1 218 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 TM4SF18Q96CE8 201 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 RPF2Q9H7B2 306 aaKnown RBP13.42□□□□□ -0.26
CBWD3-217ENST00000621474 PHF11Q9UIL8 331 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 MCM8Q9UJA3 840 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 RALYQ9UKM9 306 aaKnown RBP13.42□□□□□ -0.26
CBWD3-217ENST00000621474 MRPS33Q9Y291 106 aaKnown RBP13.42□□□□□ -0.26
CBWD3-217ENST00000621474 RAP2CQ9Y3L5 183 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 NSG1A0A0A6YYJ2 146 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 MYOCOSA0A1B0GUC4 107 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 A0A1W2PS29 197 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 ARHGAP10A1A4S6 786 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 K7EM74 188 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 CLDN4O14493 209 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 PGRMC2O15173 223 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 SKAP2O75563 359 aaPredicted RBP13.41□□□□□ -0.26
CBWD3-217ENST00000621474 SEC24DO94855 1032 aaPredicted RBP13.41□□□□□ -0.26
CBWD3-217ENST00000621474 TIA1P31483 386 aaKnown RBP eCLIP13.41□□□□□ -0.26
CBWD3-217ENST00000621474 MAPK12P53778 367 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 RRADP55042 308 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 IGLV3-21P80748 117 aaPredicted RBP13.41□□□□□ -0.26
CBWD3-217ENST00000621474 ACSM2AQ08AH3 577 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 SLC13A2Q13183 592 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 LY6DQ14210 128 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 NDUFAF5Q5TEU4 345 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 ACSM2BQ68CK6 577 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 OR4N5Q8IXE1 308 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 CLEC1AQ8NC01 280 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 FDCSPQ8NFU4 85 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.41□□□□□ -0.26
CBWD3-217ENST00000621474 DNAJB14Q8TBM8 379 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 RAB3IL1Q8TBN0 382 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 FCRL1Q96LA6 429 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 NUDT9Q9BW91 350 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 EBPLQ9BY08 206 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 SEMA4CQ9C0C4 833 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 MANSC1Q9H8J5 431 aa13.41□□□□□ -0.26
CBWD3-217ENST00000621474 C19orf25Q9UFG5 118 aaPredicted RBP13.41□□□□□ -0.26
CBWD3-217ENST00000621474 BLACEA4D250 179 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 KLF11O14901 512 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 PCDH7O60245 1069 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 CHEK2O96017 543 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 PDGFAP04085 211 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 NR2F6P10588 404 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 NEFHP12036 1026 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 BUD31P41223 144 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-217ENST00000621474 CCL11P51671 97 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 PPP2R2AP63151 447 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 OCRLQ01968 901 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 ID2Q02363 134 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 FOLH1Q04609 750 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 AIMP2Q13155 320 aaKnown RBP13.4□□□□□ -0.26
CBWD3-217ENST00000621474 IMPG1Q17R60 797 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 RFTN2Q52LD8 501 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-217ENST00000621474 SPDYAQ5MJ70 313 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 PAPD4Q6PIY7 484 aaKnown RBP13.4□□□□□ -0.26
CBWD3-217ENST00000621474 PARP9Q8IXQ6 854 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 GALNT16Q8N428 558 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 PSMF1Q92530 271 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 ABHD17AQ96GS6 310 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 UBL7Q96S82 380 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-217ENST00000621474 TUBB6Q9BUF5 446 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 ATP13A2Q9NQ11 1180 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 RIC8BQ9NVN3 520 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 C5AR2Q9P296 337 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 HEY2Q9UBP5 337 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 GIMAP2Q9UG22 337 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 CES1P1Q9UKY3 287 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-217ENST00000621474 POLR3HQ9Y535 204 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-217ENST00000621474 SPACA6W5XKT8 324 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 KALRNO60229 2985 aa13.4□□□□□ -0.26
CBWD3-217ENST00000621474 ATP6AP2A0A1C7CYW4 349 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 SLC28A1O00337 649 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 ATXN7O15265 892 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 RGS14O43566 566 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 ATP6AP2O75787 350 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 SNUPNO95149 360 aaKnown RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 PRR35P0CG20 571 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 RPL14P50914 215 aaKnown RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 OR4D2P58180 307 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 RAPSNQ13702 412 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 PLAG1Q6DJT9 500 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 DDIASQ8IXT1 998 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 NFAM1Q8NET5 270 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 ZNF75CPQ92670 426 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 WBP1Q96G27 269 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 ALOXE3Q9BYJ1 711 aa13.39□□□□□ -0.27
CBWD3-217ENST00000621474 ILKAPQ9H0C8 392 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 ZNF552Q9H707 407 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-217ENST00000621474 LRTM1Q9HBL6 345 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms