RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CYGBQ8WWM9 190 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 MSANTD3Q96H12 275 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 FBXL20Q96IG2 436 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 OR2A5Q96R48 311 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 DDX31Q9H8H2 851 aaKnown RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 SIRT5Q9NXA8 310 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 VNN3Q9NY84 501 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 SNX7Q9UNH6 387 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 PI4KAP42356 2102 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 DPPA5A6NC42 116 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 MYO1GB0I1T2 1018 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 PDPK1O15530 556 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 SCELO95171 688 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 AIFM1O95831 613 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 ST6GAL1P15907 406 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 VSX2P58304 361 aaPredicted RBP7.38□□□□□ -1.23
NEK3-207ENST00000617054 UBE2IP63279 158 aaKnown RBP7.38□□□□□ -1.23
NEK3-207ENST00000617054 MRPS35P82673 323 aaKnown RBP7.38□□□□□ -1.23
NEK3-207ENST00000617054 VLDLRP98155 873 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 BIRC2Q13490 618 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 GPR19Q15760 415 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 SPDYE7PQ495Y7 208 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 IRGCQ6NXR0 463 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 TRIM40Q6P9F5 258 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 GPR155Q7Z3F1 870 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 SYNPOQ8N3V7 929 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 OR2L5Q8NG80 312 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 PYURFQ96I23 114 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 SHDQ96IW2 340 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 KCNC2Q96PR1 638 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 CSF3RQ99062 836 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 GLIPR2Q9H4G4 154 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 DMTF1Q9Y222 760 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 ASB4Q9Y574 426 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 A0A1W2PR77 199 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 FAM227AF5H4B4 570 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 H0YGG7 62 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 SEMA3DO95025 777 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 CAPNS1P04632 268 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 UMPSP11172 480 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 GPC1P35052 558 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 CXCL12P48061 93 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 NCBP2P52298 156 aaKnown RBP eCLIP7.38□□□□□ -1.23
NEK3-207ENST00000617054 ARF3P61204 181 aaPredicted RBP7.38□□□□□ -1.23
NEK3-207ENST00000617054 ABATP80404 500 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 SIM1P81133 766 aaPredicted RBP7.38□□□□□ -1.23
NEK3-207ENST00000617054 IL1RL1Q01638 556 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 LTB4RQ15722 352 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 ATP6AP1Q15904 470 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 SPATS1Q496A3 300 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 C10orf62Q5T681 223 aaPredicted RBP7.38□□□□□ -1.23
NEK3-207ENST00000617054 SPESP1Q6UW49 350 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 CEACAM20Q6UY09 585 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 TMEM26Q6ZUK4 368 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 ARL14Q8N4G2 192 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 HORMAD2Q8N7B1 307 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 MFSD9Q8NBP5 474 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 PAPD5Q8NDF8 572 aaKnown RBP7.38□□□□□ -1.23
NEK3-207ENST00000617054 STARD8Q92502 1023 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 KAT2AQ92830 837 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 CNRIP1Q96F85 164 aaPredicted RBP7.38□□□□□ -1.23
NEK3-207ENST00000617054 HSH2DQ96JZ2 352 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 RSPO3Q9BXY4 272 aaPredicted RBP7.38□□□□□ -1.23
NEK3-207ENST00000617054 UGT2B28Q9BY64 529 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 RBCK1Q9BYM8 510 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 CHST8Q9H2A9 424 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 MUC13Q9H3R2 512 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 EQTNQ9NQ60 294 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 ZNF282Q9UDV7 671 aaPredicted RBP7.38□□□□□ -1.23
NEK3-207ENST00000617054 TSC22D4Q9Y3Q8 395 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 THADAQ6YHU6 1953 aa7.38□□□□□ -1.23
NEK3-207ENST00000617054 M0QX08 132 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 CSF2P04141 144 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 POLR2IP36954 125 aaKnown RBP7.37□□□□□ -1.23
NEK3-207ENST00000617054 EIF1AXP47813 144 aaKnown RBP7.37□□□□□ -1.23
NEK3-207ENST00000617054 PPP4R4Q6NUP7 873 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 TMEM107Q6UX40 140 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 MSANTD1Q6ZTZ1 278 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 ASPGQ86U10 573 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 ZDHHC21Q8IVQ6 265 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 SPEM1Q8N4L4 309 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 METTL27Q8N6F8 245 aaPredicted RBP7.37□□□□□ -1.23
NEK3-207ENST00000617054 AVL9Q8NBF6 648 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 TNIP2Q8NFZ5 429 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 DNAJB8Q8NHS0 232 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 UTP15Q8TED0 518 aaKnown RBP7.37□□□□□ -1.23
NEK3-207ENST00000617054 ZNF597Q96LX8 424 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 VCXQ9H320 206 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 NT5DC2Q9H857 520 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 C1GALT1Q9NS00 363 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 SIRT3Q9NTG7 399 aaPredicted RBP7.37□□□□□ -1.23
NEK3-207ENST00000617054 ANKMY1Q9P2S6 941 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 CEP192Q8TEP8 1941 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 OR2A25A4D2G3 310 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 SLC9B1P1A6NJY1 282 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 TMEM229AB2RXF0 380 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 K7ESF4 209 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 LDB3O75112 727 aa7.37□□□□□ -1.23
NEK3-207ENST00000617054 SMNDC1O75940 238 aaKnown RBP eCLIP7.37□□□□□ -1.23
NEK3-207ENST00000617054 CCNDBP1O95273 360 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms