RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	LOC100506127	A0A0U1RQW1	187 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	EDDM13	A0A1B0GTR0	161 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GRXCR1	A8MXD5	290 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PLPP1	O14494	284 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FUCA1	P04066	466 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	STS	P08842	583 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PCSK2	P16519	638 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PTX3	P26022	381 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	P2RY2	P41231	377 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IL12RB1	P42701	662 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HNRNPF	P52597	415 aa	Known RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GNA13	Q14344	377 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MAPK11	Q15759	364 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CYP2A13	Q16696	494 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SPDYE7P	Q495Y7	208 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DEPDC1	Q5TB30	811 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ERN2	Q76MJ5	926 aa	Known RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PAGE2	Q7Z2X7	111 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TAGAP	Q8N103	731 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SVOP	Q8N4V2	548 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ANKRD53	Q8N9V6	530 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TOR1AIP2	Q8NFQ8	470 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PHF10	Q8WUB8	498 aa	Known RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LGALS12	Q96DT0	336 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	YIPF6	Q96EC8	236 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	METTL2A	Q96IZ6	378 aa	Known RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	NLN	Q9BYT8	704 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	EHD1	Q9H4M9	534 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF556	Q9HAH1	456 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IMPAD1	Q9NX62	359 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	KNL1	Q8NG31	2342 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GLOD5	A6NK44	160 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	C5orf58	C9J3I9	102 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CLDN25	C9JDP6	229 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TPST2	O60704	377 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SNRNP200	O75643	2136 aa	Known RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GABARAP	O95166	117 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GADD45G	O95257	159 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LIPA	P38571	399 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CTSK	P43235	329 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MAPK9	P45984	424 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TP53BP2	Q13625	1128 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MICA	Q29983	383 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	RGS21	Q2M5E4	152 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LEXM	Q3ZCV2	418 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SIGIRR	Q6IA17	410 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	WFIKKN2	Q8TEU8	576 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	NELL2	Q99435	816 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OR52A5	Q9H2C5	316 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	EPHX3	Q9H6B9	360 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	RNF167	Q9H6Y7	350 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MYNN	Q9NPC7	610 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SLAMF7	Q9NQ25	335 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DAPK2	Q9UIK4	370 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DUSP12	Q9UNI6	340 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HSPE1-MOB4	S4R3N1	261 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ALPK3	Q96L96	1907 aa		13.23	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ALPPL2	P10696	532 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HSD17B2	P37059	387 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FEN1	P39748	380 aa	Known RBP	13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CLCNKA	P51800	687 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CRISP3	P54108	245 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CXCR4	P61073	352 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IGSF11	Q5DX21	431 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SYT6	Q5T7P8	510 aa	Predicted RBP	13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PRSS48	Q7RTY5	328 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF605	Q86T29	641 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SLC9B2	Q86UD5	537 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ADGRF3	Q8IZF5	1079 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	KRT78	Q8N1N4	520 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OXR1	Q8N573	874 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HORMAD2	Q8N7B1	307 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	AMER3	Q8N944	861 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZHX1-C8orf76	Q96EF9	292 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PPP1R16A	Q96I34	528 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SPATA9	Q9BWV2	254 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SERHL2	Q9H4I8	314 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PRKAG2	Q9UGJ0	569 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MAPRE3	Q9UPY8	281 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PCDHGB1	Q9Y5G3	927 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LINC01553	A4QN01	128 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	EFCAB9	A8MZ26	197 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OR1F1	O43749	312 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PRKRA	O75569	313 aa	Known RBP	13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GGT2	P36268	569 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FCHO2	Q0JRZ9	810 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DGUOK	Q16854	277 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ETFBKMT	Q8IXQ9	262 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	STX19	Q8N4C7	294 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CPA6	Q8N4T0	437 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	AQP11	Q8NBQ7	271 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GGH	Q92820	318 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	POLE4	Q9NR33	117 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ERGIC3	Q9Y282	383 aa		13.22	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PMF1-BGLAP	U3KQ54	211 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms