RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 PSMD11O00231 422 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 KMOO15229 486 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRAMEF4O60810 478 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 SCN2BO60939 215 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLCO2B1O94956 709 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 C1SP09871 688 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 NCBP2P52298 156 aaKnown RBP eCLIP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PPP5CP53041 499 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 SKP1P63208 163 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 B4GALNT1Q00973 533 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 MTAPQ13126 283 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 GPM6BQ13491 265 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM214AQ32MH5 1076 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRAMEF9Q5VWM5 478 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 LILRA6Q6PI73 481 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 Q6ZNX1 250 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 HMGN2P46Q86SG4 172 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 TTLQ8NG68 377 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 DNASE1L2Q92874 299 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 DEPDC7Q96QD5 511 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 TSSK6Q9BXA6 273 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ASPNQ9BXN1 380 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 MIR1-1HGQ9H1L0 117 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 DPEP2Q9H4A9 486 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 KLHL1Q9NR64 748 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 CALML5Q9NZT1 146 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ACSL5Q9ULC5 683 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 A0A1W2PP55 124 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 FUOMA2VDF0 154 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 M0R129 80 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 DLGAP1O14490 977 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZW10O43264 779 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 CH25HO95992 272 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 GDI1P31150 447 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRLHRP49683 370 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PFN3P60673 137 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 FPGSQ05932 587 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 GAB1Q13480 694 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PEX5LQ8IYB4 626 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 RHOXF1Q8NHV9 184 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 RBM18Q96H35 190 aaKnown RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 LMAN2LQ9H0V9 348 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 NECTIN3Q9NQS3 549 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 CDH7Q9ULB5 785 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 A0A1W2PQU0 124 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 IGLON5A6NGN9 336 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 HNRNPCL2B2RXH8 293 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 STK25O00506 426 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 TNFRSF21O75509 655 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 SEMA3DO95025 777 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 CYP17A1P05093 508 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 IMPDH2P12268 514 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 LARS2Q15031 903 aaKnown RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 DCDC5Q6ZRR9 648 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 USP51Q70EK9 711 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ANKRD33Q7Z3H0 272 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 UBASH3BQ8TF42 649 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 C16orf78Q8WTQ4 265 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ANKRA2Q9H9E1 313 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 MGAT4BQ9UQ53 548 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PCDHGA10Q9Y5H3 936 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 COL11A2P13942 1736 aaPredicted RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC5A10A0PJK1 596 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 AREL1O15033 823 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 GABARAPO95166 117 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 CTSEP14091 401 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 RHCEP18577 417 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ARL4DP49703 201 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 CDH11P55287 796 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 STXBP1P61764 594 aaKnown RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 RGS1Q08116 209 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 NDUFA9Q16795 377 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 TMEM236Q5W0B7 351 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 RAB12Q6IQ22 244 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC9B2Q86UD5 537 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 GJD3Q8N144 294 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR8K5Q8NH50 307 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 CLIP3Q96DZ5 547 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 HRASLS5Q96KN8 279 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 TREX2Q9BQ50 279 aaPredicted RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 GPN2Q9H9Y4 310 aaPredicted RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ACOT13Q9NPJ3 140 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRDM8Q9NQV8 689 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 DKK3Q9UBP4 350 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ITGB1BP2Q9UKP3 347 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 TCRBV5S2A0A599 114 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 HEPACAM2A8MVW5 462 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 CTDSP2O14595 271 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRSS23O95084 383 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 HMGN1P05114 100 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF8P17098 575 aaPredicted RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 NDUFS1P28331 727 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 AVPR1BP47901 424 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRDX1Q06830 199 aaKnown RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 TBCEQ15813 527 aaPredicted RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 TSTQ16762 297 aaKnown RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF57Q68EA5 555 aaPredicted RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC27A4Q6P1M0 643 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 CCBE1Q6UXH8 406 aaPredicted RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 DPPA4Q7L190 304 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms