RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 EID2Q8N6I1 236 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 OR2L5Q8NG80 312 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 ATOH1Q92858 354 aaPredicted RBP9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 RNF31Q96EP0 1072 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 GPER1Q99527 375 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 COMMD4Q9H0A8 199 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 NANOGQ9H9S0 305 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 SLC9B1P1A6NJY1 282 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 H7C0S8 307 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 PGRMC2O15173 223 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 NELFEP18615 380 aaKnown RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 ITGA3P26006 1051 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 PDHA2P29803 388 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 FOLR3P41439 243 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 OMPP47874 163 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 DNASE1L1P49184 302 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 TPMTP51580 245 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 HYAL1Q12794 435 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 TUBB3Q13509 450 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 CDKN3Q16667 212 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 C6orf52Q5T4I8 152 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF534Q76KX8 674 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 OR6K6Q8NGW6 343 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 EZH1Q92800 747 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 BIRC7Q96CA5 298 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 SH3YL1Q96HL8 342 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 METTL2AQ96IZ6 378 aaKnown RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 CD180Q99467 661 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF717Q9BY31 904 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 OR51I1Q9H343 314 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 COQ10BQ9H8M1 238 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 DMRT3Q9NQL9 472 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 PPP4R1LQ9P1A2 415 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 HCRTR2O43614 444 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 CPNE3O75131 537 aaKnown RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 SEMA3DO95025 777 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 GMPRP36959 345 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 EIF2B2P49770 351 aaKnown RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 SMSP52788 366 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 LIN52Q52LA3 116 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 NDUFAF5Q5TEU4 345 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 PDPRQ8NCN5 879 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 OR10H4Q8NGA5 316 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 OR5K2Q8NHB8 316 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 ENKURQ8TC29 256 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 NEIL2Q969S2 332 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 ZUFSPQ96AP4 578 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 CRB3Q9BUF7 120 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 NTMT1Q9BV86 223 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 UCK2Q9BZX2 261 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 TRIM2Q9C040 744 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 TMEM30AQ9NV96 361 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 NLGN3Q9NZ94 848 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 MAU2Q9Y6X3 613 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 CPSF4LA6NMK7 179 aaKnown RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 BRINP1O60477 761 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 B4GALT3O60512 393 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 SNNO75324 88 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF821O75541 412 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 SYNGR4O95473 234 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 CHRM5P08912 532 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 PSMA1P25786 263 aaKnown RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 HTR6P50406 440 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 NPTX1Q15818 432 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 VMACQ2NL98 169 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 TRIM61Q5EBN2 209 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 COQ5Q5HYK3 327 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 PEG10Q86TG7 708 aaKnown RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 KBTBD2Q8IY47 623 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF440Q8IYI8 595 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 PNPLA1Q8N8W4 532 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 OR2L8Q8NGY9 312 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF480Q8WV37 535 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 INSM2Q96T92 566 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 MAPKAP1Q9BPZ7 522 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 GSTO2Q9H4Y5 243 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 RNF121Q9H920 327 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 KCNK13Q9HB14 408 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 TM9SF3Q9HD45 589 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 EHD3Q9NZN3 535 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 PCDHGB1Q9Y5G3 927 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 PTGDR2Q9Y5Y4 395 aa9.02□□□□□ -0.97
CLTCL1-208ENST00000615606 VSTM5A8MXK1 200 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 EI24O14681 340 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 CASKO14936 926 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 GPR39O43194 453 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 PRAMEF2O60811 474 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 KIAA1024LP59773 190 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 LSM3P62310 102 aaKnown RBP9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 RHDQ02161 417 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 MAPK14Q16539 360 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 IQCCQ4KMZ1 466 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 TMEM31Q5JXX7 168 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 LETMD1Q6P1Q0 360 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 BLOC1S3Q6QNY0 202 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 RELTQ969Z4 430 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 ALPK1Q96QP1 1244 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 DHRS4Q9BTZ2 278 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 TMEM45AQ9NWC5 275 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 QSER1Q2KHR3 1735 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms