RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 CYP8B1Q9UNU6 501 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 TECTAO75443 2155 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 A0A1W2PQU0 124 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 SSX4O60224 188 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 PAK4O96013 591 aaPredicted RBP12.5□□□□□ -0.41
FOXN3-219ENST00000615335 PTX3P26022 381 aaPredicted RBP12.5□□□□□ -0.41
FOXN3-219ENST00000615335 MAT2AP31153 395 aaKnown RBP12.5□□□□□ -0.41
FOXN3-219ENST00000615335 HAAOP46952 286 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 PXNP49023 591 aaPredicted RBP12.5□□□□□ -0.41
FOXN3-219ENST00000615335 BTBD16Q32M84 506 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 KIAA1161Q6NSJ0 714 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 DLEU7Q6UYE1 221 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 GLB1L3Q8NCI6 653 aaPredicted RBP12.5□□□□□ -0.41
FOXN3-219ENST00000615335 KBTBD8Q8NFY9 601 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 USP36Q9P275 1121 aaKnown RBP12.5□□□□□ -0.41
FOXN3-219ENST00000615335 PNMA8BQ9ULN7 279 aaPredicted RBP12.5□□□□□ -0.41
FOXN3-219ENST00000615335 TBC1D24Q9ULP9 559 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 ZFR2Q9UPR6 939 aaKnown RBP12.5□□□□□ -0.41
FOXN3-219ENST00000615335 COMMD10Q9Y6G5 202 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 USP34Q70CQ2 3546 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 PLXNA2O75051 1894 aa12.5□□□□□ -0.41
FOXN3-219ENST00000615335 IFRD1O00458 451 aaPredicted RBP12.49□□□□□ -0.41
FOXN3-219ENST00000615335 OR5F1O95221 314 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ANXA6P08133 673 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 G6PDP11413 515 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 CD36P16671 472 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 JUNDP17535 347 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 DDCP20711 480 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 AGXTP21549 392 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ACRV1P26436 265 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 HLA-DMAP28067 261 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 PTGER3P43115 390 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 CXCL12P48061 93 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 HTR6P50406 440 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ISL1P61371 349 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 NR6A1Q15406 480 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 PYCR3Q53H96 274 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ARMC4Q5T2S8 1044 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ZNF691Q5VV52 312 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 LYPLAL1Q5VWZ2 237 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 RAET1GQ6H3X3 334 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
FOXN3-219ENST00000615335 STK32CQ86UX6 486 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ZDHHC13Q8IUH4 622 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 NXPE1Q8N323 547 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 OR8K5Q8NH50 307 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 OR2A14Q96R47 310 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 SCN3BQ9NY72 215 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 NFKBIL1Q9UBC1 381 aaPredicted RBP12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ANKRD12Q6UB98 2062 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 TRBV5-4A0A0C4DH59 114 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 LRRC72A6NJI9 287 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 AGAP14A8MT82 685 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 K7ESM1 405 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 APBB3O95704 486 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ESR1P03372 595 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ALPPP05187 535 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 F8A1P23610 371 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 GPR1P46091 355 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 MTPNP58546 118 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 DBPQ10586 325 aaPredicted RBP12.49□□□□□ -0.41
FOXN3-219ENST00000615335 SLAMF1Q13291 335 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 PWP1Q13610 501 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ZNF267Q14586 743 aaPredicted RBP12.49□□□□□ -0.41
FOXN3-219ENST00000615335 FAM98BQ52LJ0 330 aaKnown RBP12.49□□□□□ -0.41
FOXN3-219ENST00000615335 LAIR2Q6ISS4 152 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 GOLGA7Q7Z5G4 137 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 LILRB2Q8N423 598 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 DTWD1Q8N5C7 304 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 FBLIM1Q8WUP2 373 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 SLC38A4Q969I6 547 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ULK4Q96C45 1275 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 MBOAT4Q96T53 435 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 BOCQ9BWV1 1114 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 SLC17A9Q9BYT1 436 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 SGK2Q9HBY8 427 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 FANCFQ9NPI8 374 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 COQ3Q9NZJ6 369 aa12.49□□□□□ -0.41
FOXN3-219ENST00000615335 NUFIP1Q9UHK0 495 aaKnown RBP12.49□□□□□ -0.41
FOXN3-219ENST00000615335 TNPO3Q9Y5L0 923 aaKnown RBP12.49□□□□□ -0.41
FOXN3-219ENST00000615335 ZDBF2Q9HCK1 2354 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 CACNA1IQ9P0X4 2223 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 IQCF5A8MTL0 148 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 ZNF217O75362 1048 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 SLC22A5O76082 557 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 HOXD4P09016 255 aaPredicted RBP12.48□□□□□ -0.41
FOXN3-219ENST00000615335 RAP2AP10114 183 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 ZNF7P17097 686 aaPredicted RBP12.48□□□□□ -0.41
FOXN3-219ENST00000615335 TNNI3P19429 210 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 MSH3P20585 1137 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 DGKQP52824 942 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 CXCR4P61073 352 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 PPP2CBP62714 309 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 PPP2CAP67775 309 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 CHRNB3Q05901 458 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 DPTQ07507 201 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 PCBP2Q15366 365 aaKnown RBP eCLIP12.48□□□□□ -0.411e-6■■■■■ 27.9
FOXN3-219ENST00000615335 ANGPT1Q15389 498 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 FAM214AQ32MH5 1076 aa12.48□□□□□ -0.41
FOXN3-219ENST00000615335 C18orf21Q32NC0 220 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms