RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 C11orf65Q8NCR3 313 aa18.18■□□□□ 0.5
MMP28-204ENST00000615136 OR13H1Q8NG92 308 aa18.18■□□□□ 0.5
MMP28-204ENST00000615136 MTERF3Q96E29 417 aa18.18■□□□□ 0.5
MMP28-204ENST00000615136 C17orf62Q9BQA9 187 aa18.18■□□□□ 0.5
MMP28-204ENST00000615136 TCEAL2Q9H3H9 227 aaPredicted RBP18.18■□□□□ 0.5
MMP28-204ENST00000615136 KIR3DX1Q9H7L2 352 aa18.18■□□□□ 0.5
MMP28-204ENST00000615136 ADPRHL2Q9NX46 363 aa18.18■□□□□ 0.5
MMP28-204ENST00000615136 THUMPD1Q9NXG2 353 aaKnown RBP18.18■□□□□ 0.5
MMP28-204ENST00000615136 TAS2R9Q9NYW1 312 aa18.18■□□□□ 0.5
MMP28-204ENST00000615136 USP36Q9P275 1121 aaKnown RBP18.18■□□□□ 0.5
MMP28-204ENST00000615136 PSME2Q9UL46 239 aa18.18■□□□□ 0.5
MMP28-204ENST00000615136 NDRG4Q9ULP0 352 aaKnown RBP18.18■□□□□ 0.5
MMP28-204ENST00000615136 FAF1Q9UNN5 650 aaPredicted RBP18.18■□□□□ 0.5
MMP28-204ENST00000615136 CYP8B1Q9UNU6 501 aa18.18■□□□□ 0.5
MMP28-204ENST00000615136 PADI2Q9Y2J8 665 aa18.18■□□□□ 0.5
MMP28-204ENST00000615136 ARHGEF17Q96PE2 2063 aaPredicted RBP18.18■□□□□ 0.5
MMP28-204ENST00000615136 TRBC2A0A5B9 178 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 A6NCN8 305 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 LRIT2A6NDA9 550 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 E9PQ18 207 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 DDCP20711 480 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 SLC19A1P41440 591 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 SRP54P61011 504 aaKnown RBP18.17■□□□□ 0.5
MMP28-204ENST00000615136 PIGFQ07326 219 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 LRRC32Q14392 662 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 B3GNT8Q7Z7M8 397 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 CSF3RQ99062 836 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 EPYCQ99645 322 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 CXorf36Q9H7Y0 433 aa18.17■□□□□ 0.5
MMP28-204ENST00000615136 BTN3A3O00478 584 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 SUV39H1O43463 412 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 TNFRSF21O75509 655 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 PRKRAO75569 313 aaKnown RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 C9P02748 559 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 ZNF182P17025 639 aaPredicted RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 HTR1BP28222 390 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 RPL3P39023 403 aaKnown RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 COL9A2Q14055 689 aaPredicted RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 SIM2Q14190 667 aaPredicted RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 AMIGO1Q86WK6 493 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 NUDT13Q86X67 352 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 RNF130Q86XS8 419 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 ZC3H7AQ8IWR0 971 aaKnown RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 TTC29Q8NA56 475 aaPredicted RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 LCN9Q8WX39 176 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 PATE1Q8WXA2 126 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 RGMAQ96B86 450 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 TPD52L3Q96J77 140 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 PITX2Q99697 317 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 PITHD1Q9GZP4 211 aaPredicted RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 MAP4K5Q9Y4K4 846 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 ISM1B1AKI9 464 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 XPNPEP2O43895 674 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 CLEC3AO75596 197 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 CHRM5P08912 532 aaPredicted RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 CYP4B1P13584 511 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 SOAT1P35610 550 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 MAPK10P53779 464 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 GP2P55259 537 aaKnown RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 SNRPNP63162 240 aaKnown RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 SMAD4Q13485 552 aaKnown RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 ZIC1Q15915 447 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 ZNF542PQ5EBM4 170 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 KLHL35Q6PF15 583 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 SLC16A12Q6ZSM3 486 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 FAM81AQ8TBF8 368 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 FCRL4Q96PJ5 515 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 APOL4Q9BPW4 351 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 DOHHQ9BU89 302 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 FUNDC2Q9BWH2 189 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 DUSP21Q9H596 190 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 UBE2ZQ9H832 354 aaPredicted RBP18.16■□□□□ 0.5
MMP28-204ENST00000615136 KRT84Q9NSB2 600 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 KIF17Q9P2E2 1029 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 GMPPBQ9Y5P6 360 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 COLEC10Q9Y6Z7 277 aa18.16■□□□□ 0.5
MMP28-204ENST00000615136 A0A0A6YYD5 115 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 SERPINB1P30740 379 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 RXRGP48443 463 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 SLC35A2P78381 396 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 BNIP3Q12983 259 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 LAIR1Q6GTX8 287 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 OR4C11Q6IEV9 310 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 PAGE2Q7Z2X7 111 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 DGLUCYQ7Z3D6 616 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 OR52N2Q8NGI0 321 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 FNDC8Q8TC99 324 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 LZICQ8WZA0 190 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 EXOSC8Q96B26 276 aaKnown RBP18.15■□□□□ 0.5
MMP28-204ENST00000615136 TOE1Q96GM8 510 aaKnown RBP18.15■□□□□ 0.5
MMP28-204ENST00000615136 PHF7Q9BWX1 381 aaPredicted RBP18.15■□□□□ 0.5
MMP28-204ENST00000615136 DDX31Q9H8H2 851 aaKnown RBP18.15■□□□□ 0.5
MMP28-204ENST00000615136 C1GALT1Q9NS00 363 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 TMEM184CQ9NVA4 438 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 KLF15Q9UIH9 416 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 ENPP5Q9UJA9 477 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 PCOLCE2Q9UKZ9 415 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 SH3PXD2BA1X283 911 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 PTGES3LE9PB15 166 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 BCL10O95999 233 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms