RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 GPRC5BQ9NZH0 403 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 C2orf92A0A1B0GVN3 265 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 MT-ND5P03915 603 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 ITGB1P05556 798 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 ARSAP15289 507 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 NIPAL4Q0D2K0 466 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 CASD1Q96PB1 797 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 YTHDF1Q9BYJ9 559 aaKnown RBP19.35■□□□□ 0.69
CTDP1-208ENST00000613122 CPEB1Q9BZB8 566 aaKnown RBP19.35■□□□□ 0.69
CTDP1-208ENST00000613122 ADAMTS5Q9UNA0 930 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 PRAMEF26H0Y7S4 382 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 TOR1BO14657 336 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 SLC22A1O15245 554 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 AK1P00568 194 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 NSDHLQ15738 373 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 LRRC15Q8TF66 581 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 SCRN2Q96FV2 425 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 PPM1BO75688 479 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 RNF144AP50876 292 aaPredicted RBP19.35■□□□□ 0.69
CTDP1-208ENST00000613122 ACY1Q03154 408 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 MVKQ03426 396 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 FADDQ13158 208 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 HHIPQ96QV1 700 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 TTYH1Q9H313 450 aaPredicted RBP19.35■□□□□ 0.69
CTDP1-208ENST00000613122 HCFC1R1Q9NWW0 138 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 MBLAC1A4D2B0 266 aaPredicted RBP19.35■□□□□ 0.69
CTDP1-208ENST00000613122 GJA5P36382 358 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 KRTCAP2Q8N6L1 136 aa19.35■□□□□ 0.69
CTDP1-208ENST00000613122 METTL8Q9H825 291 aaKnown RBP19.35■□□□□ 0.69
CTDP1-208ENST00000613122 DIO3P55073 304 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 C15orf39Q6ZRI6 1047 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 MARCH4Q9P2E8 410 aaPredicted RBP19.34■□□□□ 0.69
CTDP1-208ENST00000613122 GPR37L1O60883 481 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 LRRTM3Q86VH5 581 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 SHISA4Q96DD7 197 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 MNTQ99583 582 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 LPAR4Q99677 370 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 ZBTB20Q9HC78 741 aaPredicted RBP19.34■□□□□ 0.69
CTDP1-208ENST00000613122 SLC2A2P11168 524 aaPredicted RBP19.34■□□□□ 0.69
CTDP1-208ENST00000613122 PSKH1P11801 424 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 ENTPD1P49961 510 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 DCDC1P59894 354 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 SWT1Q5T5J6 900 aaKnown RBP19.34■□□□□ 0.69
CTDP1-208ENST00000613122 GID4Q8IVV7 300 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 CEP76Q8TAP6 659 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 CHIAQ9BZP6 476 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 PROM1O43490 865 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 H2BFMP0C1H6 154 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 CDKN2DP55273 166 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 ATG9BQ674R7 924 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 ZNF761Q86XN6 746 aaPredicted RBP19.34■□□□□ 0.69
CTDP1-208ENST00000613122 ALDH16A1Q8IZ83 802 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 SHKBP1Q8TBC3 707 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 DIO2Q92813 273 aa19.34■□□□□ 0.69
CTDP1-208ENST00000613122 DLG5Q8TDM6 1919 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 UNC119BA6NIH7 251 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 S1PR1P21453 382 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 MANEALQ5VSG8 457 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 LYSMD4Q5XG99 296 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 ASB15Q8WXK1 588 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 C1orf21Q9H246 121 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 AASSQ9UDR5 926 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 LATO43561 262 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 CXCL12P48061 93 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 KIAA1614Q5VZ46 1190 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 KCTD18Q6PI47 426 aaPredicted RBP19.33■□□□□ 0.69
CTDP1-208ENST00000613122 ZSWIM9Q86XI8 627 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 TOMM5Q8N4H5 51 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 TCEANCQ8N8B7 351 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 TOR1AIP2Q8NFQ8 470 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 OR8J3Q8NGG0 315 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 OR8K5Q8NH50 307 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 TMEM41AQ96HV5 264 aa19.33■□□□□ 0.69
CTDP1-208ENST00000613122 ERMAPQ96PL5 475 aaPredicted RBP19.33■□□□□ 0.69
CTDP1-208ENST00000613122 EXOSC1Q9Y3B2 195 aaKnown RBP19.33■□□□□ 0.69
CTDP1-208ENST00000613122 FDXRP22570 491 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 RPA4Q13156 261 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 OR52P1PQ8NH57 321 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 TSPEARQ8WU66 669 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 MEAF6Q9HAF1 191 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 ENY2Q9NPA8 101 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 DNAJC27Q9NZQ0 273 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 SHC2P98077 582 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 PTGR1Q14914 329 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 PPP1R3AQ16821 1122 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 LRIT3Q3SXY7 679 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 ZNF440Q8IYI8 595 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 HUS1BQ8NHY5 278 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 TRPV4Q9HBA0 871 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 C14orf166Q9Y224 244 aaKnown RBP19.33■□□□□ 0.68
CTDP1-208ENST00000613122 FGF3P11487 239 aaPredicted RBP19.33■□□□□ 0.68
CTDP1-208ENST00000613122 GNG2P59768 71 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 FGL2Q14314 439 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 CARTPTQ16568 116 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 ERMP1Q7Z2K6 904 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 HAPLN2Q9GZV7 340 aa19.33■□□□□ 0.68
CTDP1-208ENST00000613122 VSTM2BA6NLU5 285 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 NUAK1O60285 661 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 ADORA3P0DMS8 318 aa19.32■□□□□ 0.68
CTDP1-208ENST00000613122 UNQ6126/PRO20091Q6UXV3 157 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms