RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 OR14A16Q8NHC5 309 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 ZNF721Q8TF20 911 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 ANK3Q12955 4377 aaKnown RBP21.6■■□□□ 1.05
MMP28-203ENST00000612672 HCN1O60741 890 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 WDR47O94967 919 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 LRATO95237 230 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 P04436 131 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 ASPHQ12797 758 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 CYP1B1Q16678 543 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 SPANXN3Q5MJ09 141 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 PRAMEF20Q5VT98 475 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 C9orf40Q8IXQ3 194 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 PPIL6Q8IXY8 311 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 RASGEF1CQ8N431 466 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 DAZLQ92904 295 aaKnown RBP21.59■■□□□ 1.05
MMP28-203ENST00000612672 SGCZQ96LD1 299 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 B4GALT7Q9UBV7 327 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 MRPS33Q9Y291 106 aaKnown RBP21.59■■□□□ 1.05
MMP28-203ENST00000612672 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.59■■□□□ 1.05
MMP28-203ENST00000612672 DOCK7Q96N67 2140 aa21.59■■□□□ 1.05
MMP28-203ENST00000612672 MED12Q93074 2177 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 TLN2Q9Y4G6 2542 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 HRKO00198 91 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 BMP5P22003 454 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 TACR1P25103 407 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 ZNF791Q3KP31 576 aaPredicted RBP21.58■■□□□ 1.05
MMP28-203ENST00000612672 BBS9Q3SYG4 887 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 FBXO48Q5FWF7 155 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 FAM45BPQ6NSW5 357 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 DGAT2L6Q6ZPD8 337 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 UBE3DQ7Z6J8 389 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 OR8K3Q8NH51 312 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 GOT1L1Q8NHS2 421 aaPredicted RBP21.58■■□□□ 1.05
MMP28-203ENST00000612672 FAM45AQ8TCE6 357 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 ANKRD49Q8WVL7 239 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 SERINC2Q96SA4 455 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 MAPKAP1Q9BPZ7 522 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 REXO4Q9GZR2 422 aaKnown RBP21.58■■□□□ 1.05
MMP28-203ENST00000612672 EXO5Q9H790 373 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 PRDM7Q9NQW5 492 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 ZNF490Q9ULM2 529 aaPredicted RBP21.58■■□□□ 1.05
MMP28-203ENST00000612672 PSAT1Q9Y617 370 aa21.58■■□□□ 1.05
MMP28-203ENST00000612672 CLEC3AO75596 197 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 CD22P20273 847 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 CDC25BP30305 580 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 TRPC1P48995 793 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 ASCL1P50553 236 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 MTTPP55157 894 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 TSNQ15631 228 aaKnown RBP21.57■■□□□ 1.04
MMP28-203ENST00000612672 DEFB113Q30KQ7 82 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 PIGGQ5H8A4 983 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 HP1BP3Q5SSJ5 553 aaPredicted RBP21.57■■□□□ 1.04
MMP28-203ENST00000612672 OPN5Q6U736 354 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 DOK4Q8TEW6 326 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 FAM222BQ8WU58 562 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 RNASE6Q93091 150 aaKnown RBP21.57■■□□□ 1.04
MMP28-203ENST00000612672 KIAA1191Q96A73 305 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 ANKRD9Q96BM1 317 aaPredicted RBP21.57■■□□□ 1.04
MMP28-203ENST00000612672 RHBDF1Q96CC6 855 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 F2RL3Q96RI0 385 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 EGFL8Q99944 293 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 TMEM79Q9BSE2 394 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 OARD1Q9Y530 152 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 EXPH5Q8NEV8 1989 aa21.57■■□□□ 1.04
MMP28-203ENST00000612672 A0A1W2PPR1 153 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 GABRA1P14867 456 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 GNAZP19086 355 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 CEACAM8P31997 349 aaPredicted RBP21.56■■□□□ 1.04
MMP28-203ENST00000612672 CDKL1Q00532 357 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 STX4Q12846 297 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 FBXL19-AS1Q494R0 122 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 TRIM40Q6P9F5 258 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 ZNF662Q6ZS27 426 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 LRRC25Q8N386 305 aaPredicted RBP21.56■■□□□ 1.04
MMP28-203ENST00000612672 PAQR8Q8TEZ7 354 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 RUNDC3BQ96NL0 473 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 PLEKHF2Q9H8W4 249 aa21.56■■□□□ 1.04
MMP28-203ENST00000612672 RTCAO00442 366 aaKnown RBP21.55■■□□□ 1.04
MMP28-203ENST00000612672 TAPBPO15533 448 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 TTC4O95801 387 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 RAF1P04049 648 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 HOXC12P31275 282 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 ZNF136P52737 540 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 DAZAP2Q15038 168 aaPredicted RBP21.55■■□□□ 1.04
MMP28-203ENST00000612672 MPEG1Q2M385 716 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 ACSF3Q4G176 576 aaPredicted RBP21.55■■□□□ 1.04
MMP28-203ENST00000612672 TMEM198Q66K66 360 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 BIVMQ86UB2 503 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 OR4N5Q8IXE1 308 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 TRIM58Q8NG06 486 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 TTLQ8NG68 377 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 NEIL3Q8TAT5 605 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 NT5DC2Q9H857 520 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 ZFP64Q9NPA5 681 aa21.55■■□□□ 1.04
MMP28-203ENST00000612672 PPANQ9NQ55 473 aaKnown RBP21.55■■□□□ 1.04
MMP28-203ENST00000612672 NCF1BA6NI72 391 aaPredicted RBP21.54■■□□□ 1.04
MMP28-203ENST00000612672 HSPB2A8KAH6 182 aa21.54■■□□□ 1.04
MMP28-203ENST00000612672 NCF1CA8MVU1 366 aaPredicted RBP21.54■■□□□ 1.04
MMP28-203ENST00000612672 FGF17O60258 216 aa21.54■■□□□ 1.04
MMP28-203ENST00000612672 IGKV3-11P04433 115 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms