RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 FIG4Q92562 907 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 POP5Q969H6 163 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 SLCO4A1Q96BD0 722 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ZBED6CLQ96FA7 236 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 TRAPPC9Q96Q05 1148 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 TACO1Q9BSH4 297 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 SPATA9Q9BWV2 254 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 NLNQ9BYT8 704 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 RAB33BQ9H082 229 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 VCX3BQ9H321 246 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 RPF2Q9H7B2 306 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ACSS1Q9NUB1 689 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 LRIT1Q9P2V4 623 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 FBXO4Q9UKT5 387 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ATG4BQ9Y4P1 393 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 A0A1W2PR48 441 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 SLC9B1P1A6NJY1 282 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 CXCR6O00574 342 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 P2RX6O15547 441 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 HNRNPRO43390 633 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 PROM1O43490 865 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 NUDT21O43809 227 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 KCNK5O95279 499 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 KRT75O95678 551 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ITGB2P05107 769 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 EIF2S1P05198 315 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 UQCRC2P22695 453 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 CERS1P27544 350 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 CNR2P34972 360 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 MANFP55145 182 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 POLE2P56282 527 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 BNC1Q01954 994 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 SLC14A1Q13336 389 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 GAB1Q13480 694 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 MLC1Q15049 377 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 SHBQ15464 509 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 RGNQ15493 299 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 PEAR1Q5VY43 1037 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 CPZQ66K79 652 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 IRGCQ6NXR0 463 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ZNF551Q7Z340 670 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ADGRG5Q8IZF4 528 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 C10orf111Q8N326 155 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 CSNK1A1LQ8N752 337 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 TMEM105Q8N8V8 129 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 C19orf47Q8N9M1 422 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 DTWD2Q8NBA8 298 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 PIGKQ92643 395 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 EXOSC8Q96B26 276 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ZDHHC12Q96GR4 267 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 TCTN2Q96GX1 697 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ZC3H10Q96K80 434 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 SERINC2Q96SA4 455 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 PKP2Q99959 881 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 CCDC3Q9BQI4 270 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 SLC35A5Q9BS91 424 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 EPB41L1Q9H4G0 881 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 RAD21L1Q9H4I0 556 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 IL21RQ9HBE5 538 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 NEUROD4Q9HD90 331 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 SLC35C2Q9NQQ7 365 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 EPHA6Q9UF33 1036 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 RIMS3Q9UJD0 308 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ANAPC2Q9UJX6 822 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 GDF2Q9UK05 429 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 UTS2RQ9UKP6 389 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 FBXW2Q9UKT8 454 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 AURKCQ9UQB9 309 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 LRRC42Q9Y546 428 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 RNF215Q9Y6U7 377 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 UNC13CQ8NB66 2214 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 TMEM131Q92545 1883 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 TXNDC9O14530 226 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 PGRMC2O15173 223 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 B3GALT2O43825 422 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 PEX1O43933 1283 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 SH3BP5O60239 455 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 SRPX2O60687 465 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 CREG1O75629 220 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 AIFM1O95831 613 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 C1QCP02747 245 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 NTRK1P04629 796 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 RETP07949 1114 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 GIMD1P0DJR0 217 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 GLB1P16278 677 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 ALOX12P18054 663 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 ALDH4A1P30038 563 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 CHI3L1P36222 383 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 GPR3P46089 330 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 PPM1FP49593 454 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 VSX2P58304 361 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 VAC14Q08AM6 782 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 TRIP10Q15642 601 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 VMACQ2NL98 169 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 DEFB134Q4QY38 66 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 TBCELQ5QJ74 424 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 TMEM214Q6NUQ4 689 aaKnown RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 ZCCHC8Q6NZY4 707 aaKnown RBP8.43□□□□□ -1.06
CCDC47-207ENST00000612558 SLC48A1Q6P1K1 146 aa8.43□□□□□ -1.06
CCDC47-207ENST00000612558 CEP68Q76N32 757 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms