RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SNRPNP63162 240 aaKnown RBP13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 IRF4Q15306 451 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 MAPK11Q15759 364 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 CYP2A13Q16696 494 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 MICAQ29983 383 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 PROX2Q3B8N5 592 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 FBXO46Q6PJ61 603 aaPredicted RBP13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 CENPSQ8N2Z9 138 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 HDDC3Q8N4P3 179 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 OXR1Q8N573 874 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 AQP11Q8NBQ7 271 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 GPR32P1Q8NGA4 272 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 GGHQ92820 318 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 TMEM19Q96HH6 336 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 TEFMQ96QE5 360 aaKnown RBP13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 GABARAPL3Q9BY60 117 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 EPS8L2Q9H6S3 715 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 A0A0C4DFX4 3053 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 M0R082 166 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 M0R3G1 203 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 ADAMDEC1O15204 470 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 GGT2P36268 569 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 PCBP3P57721 371 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 IFITM3Q01628 133 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 SPDYE7PQ495Y7 208 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 SYT6Q5T7P8 510 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 METRNLQ641Q3 311 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 KIAA1211LQ6NV74 962 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 BCDIN3DQ7Z5W3 292 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 KRT78Q8N1N4 520 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZNF513Q8N8E2 541 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 ARMC5Q96C12 935 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZNF514Q96K75 400 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 BTBD2Q9BX70 525 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 NLNQ9BYT8 704 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 KCNK12Q9HB15 430 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZFR2Q9UPR6 939 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 PCDHGB1Q9Y5G3 927 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR2A25A4D2G3 310 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 GADD45GO95257 159 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 C8orf89P0DMQ9 161 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 DDCP20711 480 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 XCR1P46094 333 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 PRKAG1P54619 331 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 SEC23BQ15437 767 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 SYPL1Q16563 259 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 UNC5DQ6UXZ4 953 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 CROCCP3Q8IVE0 287 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 TP53I13Q8NBR0 393 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 CXorf40BQ96DE9 158 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 TMEM38AQ9H6F2 299 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 C11orf16Q9NQ32 467 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 SIRT3Q9NTG7 399 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 WBP1LQ9NX94 342 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 STON1Q9Y6Q2 735 aa13.39□□□□□ -0.27
PCDHGA3-202ENST00000612467 C1QTNF3-AMACRE9PGA6 284 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 E9PQ18 207 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 LINC01565O15544 149 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 COQ9O75208 318 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 NTN1O95631 604 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 HNRNPCP07910 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 SLC35G4P0C7Q5 338 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 HSMCR30P0CW71 290 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 TIE1P35590 1138 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 MAPK9P45984 424 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 VASPP50552 380 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZNF793Q6ZN11 406 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 DEF8Q6ZN54 512 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 DCDC5Q6ZRR9 648 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 C6orf120Q7Z4R8 191 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 SHISA5Q8N114 240 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 LZICQ8WZA0 190 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 SIGLEC11Q96RL6 698 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 IL4I1Q96RQ9 567 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 PRR14Q9BWN1 585 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 SPATA9Q9BWV2 254 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 MDC1Q14676 2089 aaKnown RBP13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 PDPK1O15530 556 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 PTHP01270 115 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR12D1P0DN82 309 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 ST13P50502 369 aaKnown RBP13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 DUSP2Q05923 314 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 RUNX3Q13761 415 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 PTGES3Q15185 160 aaKnown RBP13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 PDGFRLQ15198 375 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 CST6Q15828 149 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 PRSS48Q7RTY5 328 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 GANCQ8TET4 914 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 SETD7Q8WTS6 366 aaKnown RBP13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 PHF10Q8WUB8 498 aaKnown RBP13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 HERVK_113Q902F9 699 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 FCRL4Q96PJ5 515 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 ALPK1Q96QP1 1244 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 PIP5K1AQ99755 562 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 AIF1LQ9BQI0 150 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 QRSL1Q9H0R6 528 aaKnown RBP13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 NMNAT1Q9HAN9 279 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 CD93Q9NPY3 652 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 POLE4Q9NR33 117 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 THAP10Q9P2Z0 257 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms