RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SREK1Q8WXA9 508 aaKnown RBP11.52□□□□□ -0.56
CBWD3-208ENST00000612050 C19orf60Q96EN9 201 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 CSF3RQ99062 836 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 C1QTNF3Q9BXJ4 246 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 BRF2Q9HAW0 419 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 RYDENQ9NUL5 291 aaKnown RBP11.52□□□□□ -0.56
CBWD3-208ENST00000612050 TMEM216Q9P0N5 145 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 VTI1BQ9UEU0 232 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 SLC12A4Q9UP95 1085 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 C17orf105B2RV13 164 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 LDB3O75112 727 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 TBX6O95947 436 aaPredicted RBP11.52□□□□□ -0.57
CBWD3-208ENST00000612050 FAM58BPP0C7Q3 252 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 HSD3B1P14060 373 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 IMPDH1P20839 514 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 HSD3B2P26439 372 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 GCAP28676 217 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 SLCO1A2P46721 670 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 UQCRFS1P47985 274 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 NEK2P51955 445 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 CASP6P55212 293 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 PKNOX1P55347 436 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 SRSF11Q05519 484 aaKnown RBP11.52□□□□□ -0.57
CBWD3-208ENST00000612050 TUBA3CQ13748 450 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 SGO1Q5FBB7 561 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 ZNF678Q5SXM1 525 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 CCNYL2Q5T2Q4 361 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 EMBQ6PCB8 327 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 TUBA3EQ6PEY2 450 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 HSDL2Q6YN16 418 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 ZNF793Q6ZN11 406 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 GPRIN3Q6ZVF9 776 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 UBE3DQ7Z6J8 389 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 GPALPP1Q8IXQ4 340 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 RDH11Q8TC12 318 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 TRPC4APQ8TEL6 797 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 NCLNQ969V3 563 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 OR8D2Q9GZM6 311 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 DDX31Q9H8H2 851 aaKnown RBP11.52□□□□□ -0.57
CBWD3-208ENST00000612050 KLHL1Q9NR64 748 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 ANKRD10Q9NXR5 420 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 KCMF1Q9P0J7 381 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 ADAM29Q9UKF5 820 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 PSME2Q9UL46 239 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 ERVK-11Q9UQG0 969 aa11.52□□□□□ -0.57
CBWD3-208ENST00000612050 KLF13Q9Y2Y9 288 aaPredicted RBP11.52□□□□□ -0.57
CBWD3-208ENST00000612050 YARS2Q9Y2Z4 477 aaKnown RBP11.52□□□□□ -0.57
CBWD3-208ENST00000612050 GCN1Q92616 2671 aaKnown RBP11.51□□□□□ -0.57
CBWD3-208ENST00000612050 TLDC2A0PJX2 215 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 KLRC4-KLRK1H3BQV0 150 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 ZNF500O60304 480 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-208ENST00000612050 ULK1O75385 1050 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 ENO1P06733 434 aaKnown RBP11.51□□□□□ -0.57
CBWD3-208ENST00000612050 PIK3R1P27986 724 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 TPP2P29144 1249 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-208ENST00000612050 DEKP35659 375 aaKnown RBP11.51□□□□□ -0.57
CBWD3-208ENST00000612050 CD96P40200 585 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 STT3AP46977 705 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 HLCSP50747 726 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 SSR4P51571 173 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 MAPK12P53778 367 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 CDH13P55290 713 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 MLF1P58340 268 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 LCP2Q13094 533 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 TRAF3Q13114 568 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 MRPL49Q13405 166 aaKnown RBP11.51□□□□□ -0.57
CBWD3-208ENST00000612050 MAPKAPK3Q16644 382 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 EIF2S3LQ2VIR3 472 aaKnown RBP11.51□□□□□ -0.57
CBWD3-208ENST00000612050 OR52E8Q6IFG1 317 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 SLC25A25Q6KCM7 469 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 SHISA5Q8N114 240 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 KIF2BQ8N4N8 673 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 CCNYL1Q8N7R7 359 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 LRRN4CLQ8ND94 238 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 NFAM1Q8NET5 270 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-208ENST00000612050 METTL6Q8TCB7 284 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 THAP3Q8WTV1 239 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-208ENST00000612050 ASB15Q8WXK1 588 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 NR4A3Q92570 626 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 NSUN5Q96P11 429 aaKnown RBP11.51□□□□□ -0.57
CBWD3-208ENST00000612050 ZNF382Q96SR6 550 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 FAIM2Q9BWQ8 316 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 ZBTB26Q9HCK0 441 aa11.51□□□□□ -0.57
CBWD3-208ENST00000612050 A0A0A6YYD5 115 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 GOLGA6L10A6NI86 522 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 A8MVJ9 347 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 PROM1O43490 865 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 DLX3O60479 287 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 ITGA10O75578 1167 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 SLC25A12O75746 678 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 OR4F21O95013 312 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 CBX6O95503 412 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 DDAH2O95865 285 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 TUBBP07437 444 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 SP1P08047 785 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 ALOX15P16050 662 aaPredicted RBP11.5□□□□□ -0.57
CBWD3-208ENST00000612050 HSD17B3P37058 310 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 HNRNPFP52597 415 aaKnown RBP11.5□□□□□ -0.57
CBWD3-208ENST00000612050 PRKAA2P54646 552 aa11.5□□□□□ -0.57
CBWD3-208ENST00000612050 ALDH6A1Q02252 535 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms