RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 C12orf76Q8N812 135 aaPredicted RBP16.4■□□□□ 0.22
NEK3-206ENST00000611833 KIAA1958Q8N8K9 716 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 KBTBD8Q8NFY9 601 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 SLC38A5Q8WUX1 472 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 OR5P2Q8WZ92 322 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 NEURL3Q96EH8 262 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 PSD2Q9BQI7 771 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 CLN6Q9NWW5 311 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 GIN1Q9NXP7 522 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 SLC23A2Q9UGH3 650 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 TMCC3Q9ULS5 477 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 CFAP20Q9Y6A4 193 aaKnown RBP16.4■□□□□ 0.22
NEK3-206ENST00000611833 CHD9Q3L8U1 2897 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 LINC01553A4QN01 128 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 MPZL2O60487 215 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 CHMP24386 653 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 CXCR2P25025 360 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 HSPB3Q12988 150 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 HEPACAMQ14CZ8 416 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 COLEC12Q5KU26 742 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 ADGRF3Q8IZF5 1079 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 BADQ92934 168 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 TM4SF18Q96CE8 201 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 ROGDIQ9GZN7 287 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 ABCG4Q9H172 646 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 OR51E2Q9H255 320 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 SLAMF7Q9NQ25 335 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 ARRDC5A6NEK1 342 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 EFCAB10A6NFE3 127 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 CAPN5O15484 640 aaPredicted RBP16.39■□□□□ 0.21
NEK3-206ENST00000611833 CD40LGP29965 261 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 GRK5P34947 590 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 CNR2P34972 360 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 RGS6P49758 472 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 DGKEP52429 567 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 CNTN1Q12860 1018 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 PUM1Q14671 1186 aaKnown RBP eCLIP16.39■□□□□ 0.21
NEK3-206ENST00000611833 FAM78AQ5JUQ0 283 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 TMEM240Q5SV17 173 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 SAXO2Q658L1 398 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 FRMPD2BQ6IN97 320 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 SLC22A16Q86VW1 577 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 ANKRD53Q8N9V6 530 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 SMG7Q92540 1137 aaKnown RBP16.39■□□□□ 0.21
NEK3-206ENST00000611833 RAB8BQ92930 207 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 TMEM19Q96HH6 336 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 COX14Q96I36 57 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 ZNF717Q9BY31 904 aaPredicted RBP16.39■□□□□ 0.21
NEK3-206ENST00000611833 RHBGQ9H310 441 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 POLE4Q9NR33 117 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 CUEDC1Q9NWM3 386 aaPredicted RBP16.39■□□□□ 0.21
NEK3-206ENST00000611833 C5AR2Q9P296 337 aa16.39■□□□□ 0.21
NEK3-206ENST00000611833 KIF26AQ9ULI4 1882 aaPredicted RBP16.39■□□□□ 0.21
NEK3-206ENST00000611833 FEZF1A0PJY2 475 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 SH3D21A4FU49 640 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 ZAR1LA6NP61 321 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 FAM227AF5H4B4 570 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 SEMA3DO95025 777 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 NFATC1O95644 943 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 RECKO95980 971 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 P2RY2P41231 377 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 LIM2P55344 173 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 UBE3AQ05086 875 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 RPA4Q13156 261 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 MED22Q15528 200 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 C6orf120Q7Z4R8 191 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 C9orf43Q8TAL5 461 aaPredicted RBP16.38■□□□□ 0.21
NEK3-206ENST00000611833 CHCHD6Q9BRQ6 235 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 MS4A8Q9BY19 250 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 A4GALTQ9NPC4 353 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 ABCB10Q9NRK6 738 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 TM7SF3Q9NS93 570 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 TAS2R16Q9NYV7 291 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 FTSJ1Q9UET6 329 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 DENND4AQ7Z401 1863 aa16.38■□□□□ 0.21
NEK3-206ENST00000611833 TRBV4-1A0A0J9YWV2 114 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 FFAR1O14842 300 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 ADAM23O75077 832 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 RPN2P04844 631 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 BSGP35613 385 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 EIF2DP41214 584 aaKnown RBP16.37■□□□□ 0.21
NEK3-206ENST00000611833 CCR8P51685 355 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 CRISP3P54108 245 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 IRF3Q14653 427 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 SOWAHCQ53LP3 525 aaPredicted RBP16.37■□□□□ 0.21
NEK3-206ENST00000611833 TMC5Q6UXY8 1006 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 ZNF367Q7RTV3 350 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 HEATR4Q86WZ0 1026 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 NATD1Q8N6N6 113 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 ITFG2Q969R8 447 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 EXOSC8Q96B26 276 aaKnown RBP16.37■□□□□ 0.21
NEK3-206ENST00000611833 QRFPRQ96P65 431 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 LGR4Q9BXB1 951 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 RNF167Q9H6Y7 350 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 PELI2Q9HAT8 420 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 NEUROD4Q9HD90 331 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 ZNF229Q9UJW7 825 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 KCND3Q9UK17 655 aa16.37■□□□□ 0.21
NEK3-206ENST00000611833 WBP11Q9Y2W2 641 aaKnown RBP16.37■□□□□ 0.21
NEK3-206ENST00000611833 IFT52Q9Y366 437 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms