RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 GSTM5P46439 218 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 GRSF1Q12849 480 aaKnown RBP eCLIP12.93□□□□□ -0.34
NEK3-205ENST00000610828 FOXD4Q12950 439 aaPredicted RBP12.93□□□□□ -0.34
NEK3-205ENST00000610828 TMEM31Q5JXX7 168 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 B3GNT8Q7Z7M8 397 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 ARMC8Q8IUR7 673 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 OR4E2Q8NGC2 313 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 SLC38A5Q8WUX1 472 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 OR1E3Q8WZA6 343 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 FEVQ99581 238 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 DGCR6LQ9BY27 220 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 THSD1Q9NS62 852 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 SIRT3Q9NTG7 399 aaPredicted RBP12.93□□□□□ -0.34
NEK3-205ENST00000610828 HEBP2Q9Y5Z4 205 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 WASHC1A8K0Z3 465 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 KDM1AO60341 852 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 NOL3O60936 208 aaKnown RBP12.93□□□□□ -0.34
NEK3-205ENST00000610828 SEC14L2O76054 403 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 CALRP27797 417 aaKnown RBP12.93□□□□□ -0.34
NEK3-205ENST00000610828 GSSP48637 474 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 RPP38P78345 283 aaKnown RBP12.93□□□□□ -0.34
NEK3-205ENST00000610828 ABATP80404 500 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 SLC9A5Q14940 896 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 DUSP7Q16829 419 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 TMEM35AQ53FP2 167 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 AP1ARQ63HQ0 302 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 WASH2PQ6VEQ5 465 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 TSPYL5Q86VY4 417 aaPredicted RBP12.93□□□□□ -0.34
NEK3-205ENST00000610828 SLC30A8Q8IWU4 369 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 OR10G2Q8NGC3 310 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 OR8K5Q8NH50 307 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 LCN9Q8WX39 176 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 ZNF566Q969W8 418 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 TSACCQ96A04 125 aaPredicted RBP12.93□□□□□ -0.34
NEK3-205ENST00000610828 DOK1Q99704 481 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 KIR3DX1Q9H7L2 352 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 TIMMDC1Q9NPL8 285 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 RASSF1Q9NS23 344 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 HSPE1-MOB4S4R3N1 261 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 C4orf51C9J302 202 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 ANHXE9PGG2 379 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 TMX2-CTNND1H3BSU7 103 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 B4GALT2O60909 372 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 CMPK1P30085 196 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 GPC1P35052 558 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 LTBRP36941 435 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 CCT3P49368 545 aaKnown RBP12.92□□□□□ -0.34
NEK3-205ENST00000610828 KIAA1024LP59773 190 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 TRA2BP62995 288 aaKnown RBP12.92□□□□□ -0.34
NEK3-205ENST00000610828 HYAL2Q12891 473 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 TPRG1LQ5T0D9 272 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 USP30Q70CQ3 517 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 AMIGO1Q86WK6 493 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 TBC1D19Q8N5T2 526 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 SLC5A8Q8N695 610 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 CCL4L1Q8NHW4 92 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 RPLP0P6Q8NHW5 317 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 MS4A6EQ96DS6 147 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 TMEM19Q96HH6 336 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 MAGED4Q96JG8 741 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 KCNC2Q96PR1 638 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 FAIM2Q9BWQ8 316 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 ACSS1Q9NUB1 689 aaPredicted RBP12.92□□□□□ -0.34
NEK3-205ENST00000610828 FAM32AQ9Y421 112 aaKnown RBP12.92□□□□□ -0.34
NEK3-205ENST00000610828 TRBV23OR9-2A0A075B6M9 112 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 DRD2P14416 443 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 NDUFV2P19404 249 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 DRD1P21728 446 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 NUP107P57740 925 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 SLAMF1Q13291 335 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 GANABQ14697 944 aaKnown RBP12.92□□□□□ -0.34
NEK3-205ENST00000610828 NFATC4Q14934 902 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 ZIC1Q15915 447 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 EXOC3L2Q2M3D2 409 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 LGI4Q8N135 537 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 UBE2FQ969M7 185 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 ZNF764Q96H86 408 aaPredicted RBP12.92□□□□□ -0.34
NEK3-205ENST00000610828 CNDP2Q96KP4 475 aaKnown RBP12.92□□□□□ -0.34
NEK3-205ENST00000610828 WDR92Q96MX6 357 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 GLIPR2Q9H4G4 154 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 A4GALTQ9NPC4 353 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 RLIMQ9NVW2 624 aa12.92□□□□□ -0.34
NEK3-205ENST00000610828 WARS2Q9UGM6 360 aaKnown RBP12.92□□□□□ -0.34
NEK3-205ENST00000610828 BRWD1Q9NSI6 2320 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 CCDC88CQ9P219 2028 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 A0A1W2PPW3 197 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 HMGN4O00479 90 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 ERAL1O75616 437 aaKnown RBP12.91□□□□□ -0.34
NEK3-205ENST00000610828 DNAJB5O75953 348 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 IFNW1P05000 195 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 HIST1H1TP22492 207 aaPredicted RBP12.91□□□□□ -0.34
NEK3-205ENST00000610828 HTR1BP28222 390 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 AHRP35869 848 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 ACTR1BP42025 376 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 XCR1P46094 333 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 ACTR1AP61163 376 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 TUBA3CQ13748 450 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 MAD2L1BPQ15013 274 aaPredicted RBP12.91□□□□□ -0.34
NEK3-205ENST00000610828 SMN1Q16637 294 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms