RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 STARD5Q9NSY2 213 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ZSCAN32Q9NX65 697 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ALKBH4Q9NXW9 302 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 CRNNQ9UBG3 495 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 MAU2Q9Y6X3 613 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 SPTBN2O15020 2390 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 FAM221BA6H8Z2 402 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 CENPXA8MT69 81 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TLR4O00206 839 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 SCDO00767 359 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 LSM1O15116 133 aaKnown RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 HOXC11O43248 304 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 PROS1P07225 676 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 FHP07954 510 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 MTHFD2P13995 350 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 MYL9P24844 172 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ITGB8P26012 769 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 CXCL12P48061 93 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 RPS6KA3P51812 740 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TAP2Q03519 686 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 LRRC25Q8N386 305 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 PLA2G15Q8NCC3 412 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 NETO1Q8TDF5 533 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ADAMTS19Q8TE59 1207 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 HLA-CQ95604 372 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM125Q96AQ2 219 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 BHLHE41Q9C0J9 482 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ELL3Q9HB65 397 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 GEMIN8Q9NWZ8 242 aaKnown RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 CACNA1CQ13936 2221 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 GABRR3A8MPY1 467 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ANHXE9PGG2 379 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 LINC01565O15544 149 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 EMC8O43402 210 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 DUX1O43812 170 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 XPNPEP2O43895 674 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 DRD2P14416 443 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 CXCR1P25024 350 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 HK3P52790 923 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 MRPS21P82921 87 aaKnown RBP6.95□□□□□ -1.3
CSDE1-218ENST00000610726 RBBP4Q09028 425 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 COX10Q12887 443 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ATP6AP1Q15904 470 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 SPATS1Q496A3 300 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 FLYWCH1Q4VC44 716 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 SLC35F1Q5T1Q4 408 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM164Q5U3C3 297 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 LCTLQ6UWM7 567 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 RETREG3Q86VR2 466 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TDHQ8IZJ6 230 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 GPR78Q96P69 363 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 NELL2Q99435 816 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TSSK6Q9BXA6 273 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 EHD1Q9H4M9 534 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ABCB9Q9NP78 766 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 ACTR10Q9NZ32 417 aa6.95□□□□□ -1.3
CSDE1-218ENST00000610726 TRIP11Q15643 1979 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 OR7A17O14581 309 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF821O75541 412 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 EGFP01133 1207 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 CBLP22681 906 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 POU6F2P78424 691 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 LRP8Q14114 963 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 OR52E8Q6IFG1 317 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 PTCRAQ6ISU1 281 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 FRRS1Q6ZNA5 592 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 Q6ZNB5 142 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 CXXC5Q7LFL8 322 aaKnown RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 C12orf40Q86WS4 652 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 GALNT12Q8IXK2 581 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM156Q8N614 296 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF527Q8NB42 609 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 UBASH3BQ8TF42 649 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 IPCEF1Q8WWN9 437 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM19Q96HH6 336 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 S100A13Q99584 98 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 CFL2Q9Y281 166 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 BTBD3Q9Y2F9 522 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 NUP214P35658 2090 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 IRGMA1A4Y4 181 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 H3BSA7 217 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 PEX11BO96011 259 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 IFI30P13284 250 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 PORP16435 677 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 GGT1P19440 569 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ATP5A1P25705 553 aaKnown RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 TAS2R38P59533 333 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 PRDX1Q06830 199 aaKnown RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 TLR1Q15399 786 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ASTLQ6HA08 431 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 LCN8Q6JVE9 175 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 METTL2BQ6P1Q9 378 aaKnown RBP6.94□□□□□ -1.3
CSDE1-218ENST00000610726 LILRA6Q6PI73 481 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 OAFQ86UD1 273 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 TCEANCQ8N8B7 351 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM203Q969S6 136 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 ISL2Q96A47 359 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 FAM129BQ96TA1 746 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 PREBQ9HCU5 417 aa6.94□□□□□ -1.3
CSDE1-218ENST00000610726 DNAJC27Q9NZQ0 273 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms