RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TUBD1Q9UJT1 453 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 FER1L5A0AVI2 2057 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 A0A1W2PR48 441 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 TMEM233B4DJY2 109 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 KLF11O14901 512 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 PIP5K1BO14986 540 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 SEC22BO75396 215 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 LINC00032P0C843 101 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 TIA1P31483 386 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTSA-219ENST00000607841 HNRNPFP52597 415 aaKnown RBP13.38□□□□□ -0.27
CTSA-219ENST00000607841 SOX8P57073 446 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 CHAF1BQ13112 559 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 PCOLCEQ15113 449 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 NR6A1Q15406 480 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 EXT1Q16394 746 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 LINC00303Q3SY05 128 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 SFT2D3Q587I9 215 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 CES4AQ5XG92 561 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 CPZQ66K79 652 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 C18orf63Q68DL7 685 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 OR52E8Q6IFG1 317 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 ATG14Q6ZNE5 492 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 KBTBD2Q8IY47 623 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 GALNT16Q8N428 558 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 ZNF781Q8N8C0 355 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 LSM14AQ8ND56 463 aaKnown RBP13.38□□□□□ -0.27
CTSA-219ENST00000607841 TMEM52Q8NDY8 209 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 PPP3R2Q96LZ3 170 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 C20orf27Q9GZN8 174 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 TUBB1Q9H4B7 451 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 LRTM1Q9HBL6 345 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 MED4Q9NPJ6 270 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 INTS9Q9NV88 658 aaKnown RBP13.38□□□□□ -0.27
CTSA-219ENST00000607841 C1orf109Q9NX04 203 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 HAO1Q9UJM8 370 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 PSME2Q9UL46 239 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 WBP11Q9Y2W2 641 aaKnown RBP13.38□□□□□ -0.27
CTSA-219ENST00000607841 TMED5Q9Y3A6 229 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 CCL27Q9Y4X3 112 aa13.38□□□□□ -0.27
CTSA-219ENST00000607841 IGHV3-20A0A0C4DH32 117 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 C1orf226A1L170 272 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 SNNO75324 88 aaPredicted RBP13.37□□□□□ -0.27
CTSA-219ENST00000607841 SEC24DO94855 1032 aaPredicted RBP13.37□□□□□ -0.27
CTSA-219ENST00000607841 AIFM1O95831 613 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 IFNA16P05015 189 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 ANXA4P09525 319 aaPredicted RBP13.37□□□□□ -0.27
CTSA-219ENST00000607841 NR1D1P20393 614 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 ITGA3P26006 1051 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 KCNAB2Q13303 367 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 HEPACAMQ14CZ8 416 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 NDUFAF5Q5TEU4 345 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 PAPD4Q6PIY7 484 aaKnown RBP13.37□□□□□ -0.27
CTSA-219ENST00000607841 RIPOR1Q6ZS17 1223 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 Q6ZSR9 355 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 CLNKQ7Z7G1 428 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 ARFGAP2Q8N6H7 521 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 LRRC8CQ8TDW0 803 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 TM4SF18Q96CE8 201 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 C11orf24Q96F05 449 aaPredicted RBP13.37□□□□□ -0.27
CTSA-219ENST00000607841 IMMP1LQ96LU5 166 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 SORT1Q99523 831 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 MESP1Q9BRJ9 268 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 ALOXE3Q9BYJ1 711 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 TRIM55Q9BYV6 548 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 ZNF395Q9H8N7 513 aaPredicted RBP13.37□□□□□ -0.27
CTSA-219ENST00000607841 TEX10Q9NXF1 929 aaPredicted RBP13.37□□□□□ -0.27
CTSA-219ENST00000607841 VTI1BQ9UEU0 232 aa13.37□□□□□ -0.27
CTSA-219ENST00000607841 DSPP15924 2871 aaKnown RBP13.37□□□□□ -0.27
CTSA-219ENST00000607841 PKD1L2Q7Z442 2459 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 A6NL46 340 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 SLCO1B7G3V0H7 640 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 DYRK3O43781 588 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 LDB3O75112 727 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 SKAP2O75563 359 aaPredicted RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 CEACAM4O75871 244 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 DNAJB5O75953 348 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 GPR75O95800 540 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 ALPPP05187 535 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 SERPINA7P05543 415 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 FAM87AP0C7U9 286 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 COX7A2P14406 83 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 DRD2P14416 443 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 TNNI3P19429 210 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 TAS2R50P59544 299 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 RAE1P78406 368 aaKnown RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 FOLH1Q04609 750 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 ZNF763Q0D2J5 394 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 KIAA0040Q15053 153 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 TERF2Q15554 542 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 ELAVL1Q15717 326 aaKnown RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 BTBD16Q32M84 506 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 ATP6AP1LQ52LC2 224 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 PLAG1Q6DJT9 500 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 NOXRED1Q6NXP6 359 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 JMJD6Q6NYC1 403 aaPredicted RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 PARP9Q8IXQ6 854 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 TMEM132CQ8N3T6 1108 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 M1APQ8TC57 530 aa13.36□□□□□ -0.27
CTSA-219ENST00000607841 ZNF75CPQ92670 426 aaPredicted RBP13.36□□□□□ -0.27
CTSA-219ENST00000607841 DAZLQ92904 295 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms