RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ELAVL1Q15717 326 aaKnown RBP17.44■□□□□ 0.38
PNKP-213ENST00000599543 HIST2H2ACQ16777 129 aaPredicted RBP17.44■□□□□ 0.38
PNKP-213ENST00000599543 HIST2H2AA3Q6FI13 130 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 GDF7Q7Z4P5 450 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 SULF2Q8IWU5 870 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 STAG3L4Q8TBR4 150 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 WDR34Q96EX3 536 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 KCNC2Q96PR1 638 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 CSF3RQ99062 836 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 CPSF2Q9P2I0 782 aaKnown RBP17.44■□□□□ 0.38
PNKP-213ENST00000599543 ZNF223Q9UK11 482 aaPredicted RBP17.44■□□□□ 0.38
PNKP-213ENST00000599543 ZNF490Q9ULM2 529 aaPredicted RBP17.44■□□□□ 0.38
PNKP-213ENST00000599543 DAPP1Q9UN19 280 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 CLDN16Q9Y5I7 305 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 CLCA3PQ9Y6N3 262 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 DNAJC13O75165 2243 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 ZNF407Q9C0G0 2248 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 IQANK1A0A1B0GTG1 560 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 PEX1O43933 1283 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 PRAMEF4O60810 478 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 ZFAND5O76080 213 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 CLDN14O95500 239 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 CD22P20273 847 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 PTGER1P34995 402 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 RFC3P40938 356 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 IRF8Q02556 426 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 STX4Q12846 297 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 TECRLQ5HYJ1 363 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 LGSNQ5TDP6 509 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 PRAMEF9Q5VWM5 478 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 EMBQ6PCB8 327 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 LRRC70Q7Z2Q7 622 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 TMEM132CQ8N3T6 1108 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 SRFBP1Q8NEF9 429 aaKnown RBP17.43■□□□□ 0.38
PNKP-213ENST00000599543 MZB1Q8WU39 189 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 DAZLQ92904 295 aaKnown RBP17.43■□□□□ 0.38
PNKP-213ENST00000599543 CAVIN3Q969G5 261 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 PHF12Q96QT6 1004 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 F2RL3Q96RI0 385 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 ROGDIQ9GZN7 287 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 TIMMDC1Q9NPL8 285 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 NUDT4Q9NZJ9 180 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 PTBP2Q9UKA9 531 aaKnown RBP17.43■□□□□ 0.38
PNKP-213ENST00000599543 ERVK-11Q9UQG0 969 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 YARS2Q9Y2Z4 477 aaKnown RBP17.43■□□□□ 0.38
PNKP-213ENST00000599543 OTOGQ6ZRI0 2925 aa17.43■□□□□ 0.38
PNKP-213ENST00000599543 A8MVJ9 347 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 E9PLN8 166 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 CYR61O00622 381 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 CDC40O60508 579 aaKnown RBP eCLIP17.42■□□□□ 0.38
PNKP-213ENST00000599543 PYGBP11216 843 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 MTHFD2P13995 350 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 GPR143P51810 404 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 GPR85P60893 370 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 CHIT1Q13231 466 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 ACAP2Q15057 778 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 PFKFB4Q16877 469 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 KLC3Q6P597 504 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 C3P1Q6ZMU1 363 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 MDGA2Q7Z553 956 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 DOLPP1Q86YN1 238 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 CHERPQ8IWX8 916 aaKnown RBP17.42■□□□□ 0.38
PNKP-213ENST00000599543 PHF10Q8WUB8 498 aaKnown RBP17.42■□□□□ 0.38
PNKP-213ENST00000599543 ASB15Q8WXK1 588 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 UBE2E3Q969T4 207 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 VKORC1Q9BQB6 163 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 CD244Q9BZW8 370 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 HPF1Q9NWY4 346 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 KCMF1Q9P0J7 381 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 XPR1Q9UBH6 696 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 RAB21Q9UL25 225 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 SPACA6W5XKT8 324 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 EML6Q6ZMW3 1958 aa17.42■□□□□ 0.38
PNKP-213ENST00000599543 HS6ST1O60243 411 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 PRKNO60260 465 aaPredicted RBP17.41■□□□□ 0.38
PNKP-213ENST00000599543 CTNSO60931 367 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 OR2J2O76002 312 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 GFAPP14136 432 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 PTGS2P35354 604 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 TBCCQ15814 346 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 HSDL2Q6YN16 418 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 TIFABQ6ZNK6 161 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 NCCRP1Q6ZVX7 275 aaPredicted RBP17.41■□□□□ 0.38
PNKP-213ENST00000599543 CCDC91Q7Z6B0 441 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 GPALPP1Q8IXQ4 340 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 ZFP62Q8NB50 900 aaPredicted RBP17.41■□□□□ 0.38
PNKP-213ENST00000599543 PSD4Q8NDX1 1056 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 OR14A16Q8NHC5 309 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 MTFMTQ96DP5 389 aaKnown RBP17.41■□□□□ 0.38
PNKP-213ENST00000599543 MTBPQ96DY7 904 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 TBCDQ9BTW9 1192 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 ALOXE3Q9BYJ1 711 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 LYRM4Q9HD34 91 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 PRDM7Q9NQW5 492 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 VTI1BQ9UEU0 232 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 FETUBQ9UGM5 382 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 PPT2Q9UMR5 302 aa17.41■□□□□ 0.38
PNKP-213ENST00000599543 TEP1Q99973 2627 aaKnown RBP17.4■□□□□ 0.38
PNKP-213ENST00000599543 A0A1B0GTH9 108 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 SIX3O95343 332 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms