RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 DDX31Q9H8H2 851 aaKnown RBP9.8□□□□□ -0.84
CCDC9-203ENST00000596938 PRM3Q9NNZ6 103 aa9.8□□□□□ -0.84
CCDC9-203ENST00000596938 XPR1Q9UBH6 696 aa9.8□□□□□ -0.84
CCDC9-203ENST00000596938 PHF11Q9UIL8 331 aa9.8□□□□□ -0.84
CCDC9-203ENST00000596938 FBXW2Q9UKT8 454 aa9.8□□□□□ -0.84
CCDC9-203ENST00000596938 YARS2Q9Y2Z4 477 aaKnown RBP9.8□□□□□ -0.84
CCDC9-203ENST00000596938 MAST4O15021 2626 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 TMEM200CA6NKL6 621 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 NME2P1O60361 137 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 LDB3O75112 727 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 ITGA10O75578 1167 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 SLC25A12O75746 678 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 WISP2O76076 250 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 SEMA3DO95025 777 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 UNC5CO95185 931 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 TNNI3P19429 210 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 NME2P22392 152 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 BSGP35613 385 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 NEK2P51955 445 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 CCNG1P51959 295 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 PMP22Q01453 160 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 RBPJQ06330 500 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 SLC29A2Q14542 456 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 HSDL2Q6YN16 418 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 MAMDC2Q7Z304 686 aaPredicted RBP9.79□□□□□ -0.84
CCDC9-203ENST00000596938 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.79□□□□□ -0.84
CCDC9-203ENST00000596938 GPALPP1Q8IXQ4 340 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 TMEM156Q8N614 296 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 POGLUT1Q8NBL1 392 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 MYRIPQ8NFW9 859 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 OR52B6Q8NGF0 335 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 RBM18Q96H35 190 aaKnown RBP9.79□□□□□ -0.84
CCDC9-203ENST00000596938 FRMD6Q96NE9 622 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 SERPINI1Q99574 410 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 SORBS1Q9BX66 1292 aaKnown RBP9.79□□□□□ -0.84
CCDC9-203ENST00000596938 ZNF717Q9BY31 904 aaPredicted RBP9.79□□□□□ -0.84
CCDC9-203ENST00000596938 RPF2Q9H7B2 306 aaKnown RBP9.79□□□□□ -0.84
CCDC9-203ENST00000596938 ZBTB26Q9HCK0 441 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 MYOTQ9UBF9 498 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 PCTPQ9UKL6 214 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 ATG4BQ9Y4P1 393 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 ASB4Q9Y574 426 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 DOPEY2Q9Y3R5 2298 aa9.79□□□□□ -0.84
CCDC9-203ENST00000596938 DOPEY1Q5JWR5 2465 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 A0A0A6YYD5 115 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 MYOCOSA0A1B0GUC4 107 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 C17orf105B2RV13 164 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 KLRC4-KLRK1H3BQV0 150 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 ASNA1O43681 348 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 FGF17O60258 216 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 PRKNO60260 465 aaPredicted RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 EEDO75530 441 aaKnown RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 ETHE1O95571 254 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 GPR75O95800 540 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 CLDN1O95832 211 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 RPS17P08708 135 aaKnown RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 FAM153BP0C7A2 387 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 RHOXF2BP0C7M4 288 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 FAM58BPP0C7Q3 252 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 COX7A2P14406 83 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 BUD31P41223 144 aaPredicted RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 STT3AP46977 705 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 SSR4P51571 173 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 ALDH6A1Q02252 535 aaKnown RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 SRSF11Q05519 484 aaKnown RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 TRAF3Q13114 568 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 FAM153CQ494X1 144 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 GGTA1PQ4G0N0 100 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 FRG2Q64ET8 278 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 C18orf63Q68DL7 685 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 MILR1Q7Z6M3 343 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 SIAH3Q8IW03 269 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 OR5L2Q8NGL0 311 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 ACMSDQ8TDX5 336 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 SENP5Q96HI0 755 aaPredicted RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 GPR137Q96N19 417 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 NSUN5Q96P11 429 aaKnown RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 CDK15Q96Q40 435 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 FRG2BQ96QU4 278 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 RHOXF2Q9BQY4 288 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 RYDENQ9NUL5 291 aaKnown RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 LYARQ9NX58 379 aaKnown RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 AHSPQ9NZD4 102 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 ZNF835Q9Y2P0 537 aa9.78□□□□□ -0.84
CCDC9-203ENST00000596938 KLF13Q9Y2Y9 288 aaPredicted RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 SPTAN1Q13813 2472 aaKnown RBP9.78□□□□□ -0.84
CCDC9-203ENST00000596938 IQANK1A0A1B0GTG1 560 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 A0A1W2PR48 441 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 A8MT66 165 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 NPIPA5E9PKD4 350 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 DYRK3O43781 588 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 PEX1O43933 1283 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 TMPRSS11DO60235 418 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 SLC19A2O60779 497 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 OR2J2O76002 312 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 OTCP00480 354 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 IGKV3-11P04433 115 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 TAC1P20366 129 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 GALNSP34059 522 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 HSD17B3P37058 310 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms