RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 IST1P53990 364 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 ASPHQ12797 758 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 LAPTM5Q13571 262 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 DOC2AQ14183 400 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 FRG1Q14331 258 aaKnown RBP9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 PAGE2BQ5JRK9 111 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 C1orf185Q5T7R7 199 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 WLSQ5T9L3 541 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 SULT1C3Q6IMI6 304 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 SYDE1Q6ZW31 735 aaPredicted RBP9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 VN1R5Q7Z5H4 357 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 WDR53Q7Z5U6 358 aaPredicted RBP9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 GPSM1Q86YR5 675 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 SPATA6LQ8N4H0 392 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 MYRIPQ8NFW9 859 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 OR8K3Q8NH51 312 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 SARAFQ96BY9 339 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 KRT12Q99456 494 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 MAPKAP1Q9BPZ7 522 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 TMEM79Q9BSE2 394 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 TBCDQ9BTW9 1192 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 EFCAB11Q9BUY7 163 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 TRIM31Q9BZY9 425 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 DERL2Q9GZP9 239 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 RHOJQ9H4E5 214 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 EHD1Q9H4M9 534 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 POPDC3Q9HBV1 291 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 LYRM4Q9HD34 91 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 DNAJB12Q9NXW2 375 aaKnown RBP9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 NSMCE4AQ9NXX6 385 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 MOCS1Q9NZB8 636 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 CD274Q9NZQ7 290 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 COPS7AQ9UBW8 275 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 Q9UFV3 132 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 FAM215AQ9Y5M1 114 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 CELSR1Q9NYQ6 3014 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 MED12Q93074 2177 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 TRGV5A0A0B4J1U4 118 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 A0A1B0GVC2 190 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 RTCAO00442 366 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 AQP7O14520 342 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 ZSCAN12O43309 604 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 SUSD5O60279 629 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 ZNF354AO60765 605 aaPredicted RBP9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 PRAMEF4O60810 478 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 WDR1O75083 606 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 ETHE1O95571 254 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 TGFB1P01137 390 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 S100BP04271 92 aaPredicted RBP9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 CELA3AP09093 270 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 CCDC166P0CW27 439 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 CCL3P10147 92 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 PCNAP12004 261 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 CD99P14209 185 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 TCP1P17987 556 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 ATP5A1P25705 553 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 GGT5P36269 586 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 PIGAP37287 484 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 MSH2P43246 934 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 KCNC1P48547 511 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 DR1Q01658 176 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 POU4F1Q01851 419 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 IRF8Q02556 426 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 CHIT1Q13231 466 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 SNTB1Q13884 538 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 FASTKD3Q14CZ7 662 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 PDK4Q16654 411 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 AP5B1Q2VPB7 878 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 PRAMEF9Q5VWM5 478 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 SLC22A10Q63ZE4 541 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 RTL6Q6ICC9 239 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 ARSKQ6UWY0 536 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 ZNF793Q6ZN11 406 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 LIX1LQ8IVB5 337 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 OR4N5Q8IXE1 308 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 ACOT4Q8N9L9 421 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 C7orf57Q8NEG2 295 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 SLC22A8Q8TCC7 542 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 ZNF721Q8TF20 911 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 EXT2Q93063 718 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 TSPAN17Q96FV3 270 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 DGAT2Q96PD7 388 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 KCNC2Q96PR1 638 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 PHACTR1Q9C0D0 580 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 CAB39LQ9H9S4 337 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 SEMA4BQ9NPR2 832 aaPredicted RBP9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 TXNDC16Q9P2K2 825 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 MTO1Q9Y2Z2 717 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 ATG4BQ9Y4P1 393 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 MED12LQ86YW9 2145 aa9.76□□□□□ -0.85
CHMP2A-202ENST00000596708 EFCAB8A8MWE9 144 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 SAP18O00422 153 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 PHGDHO43175 533 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 DYRK3O43781 588 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 HCN1O60741 890 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 PIAS1O75925 651 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 SEC31AO94979 1220 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 GABRA1P14867 456 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 CD1DP15813 335 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms