RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 FAM180AQ6UWF9 173 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 TDRPQ86YL5 185 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 BCORP1Q8N888 145 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 SUN3Q8TAQ9 357 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 PRR7Q8TB68 274 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 NCLNQ969V3 563 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 TMEM237Q96Q45 408 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 HES7Q9BYE0 225 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 DEFB126Q9BYW3 111 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 MS4A12Q9NXJ0 267 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 ABI3Q9P2A4 366 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 EMCNQ9ULC0 261 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 PCDHGB6Q9Y5F9 930 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 SPACA6W5XKT8 324 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 TMEM200CA6NKL6 621 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 WASHC1A8K0Z3 465 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 CDK2AP1O14519 115 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 FGF17O60258 216 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 PRKNO60260 465 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 ZNF500O60304 480 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 NEURL1O76050 574 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 OTCP00480 354 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 IFNA16P05015 189 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 TAC1P20366 129 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 IMPDH1P20839 514 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 ATP5F1P24539 256 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 SLCO1A2P46721 670 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 CLCQ05315 142 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 SERTAD2Q14140 314 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 C10orf62Q5T681 223 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 ZNF227Q86WZ6 799 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 OR4N5Q8IXE1 308 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 TMEM132CQ8N3T6 1108 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 MYRIPQ8NFW9 859 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 TRPC4APQ8TEL6 797 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 THAP3Q8WTV1 239 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 VMP1Q96GC9 406 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 SCMH1Q96GD3 660 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 SERPINI1Q99574 410 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 RPF2Q9H7B2 306 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 TRIM45Q9H8W5 580 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 FARSBQ9NSD9 589 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 DCDC2Q9UHG0 476 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 CLCA3PQ9Y6N3 262 aa17.23■□□□□ 0.35
SHKBP1-202ENST00000593764 SPTAN1Q13813 2472 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 A0A1W2PR48 441 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 PRKRAO75569 313 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 SUPT7LO94864 414 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 SEMA3DO95025 777 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 RASAL1O95294 804 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 DDAH2O95865 285 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 EDN3P14138 238 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 TRHRP34981 398 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 TDGF1P3P51864 188 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 PRKAA2P54646 552 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 VSNL1P62760 191 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 TNFRSF17Q02223 184 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 SRSF11Q05519 484 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 IFT88Q13099 833 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 RASA2Q15283 850 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 TTC19Q6DKK2 380 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 ZNF321PQ8N8H1 164 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 NR4A3Q92570 626 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 TANKQ92844 425 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 DAZLQ92904 295 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 PPCSQ9HAB8 311 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 OLAHQ9NV23 265 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 LRFN1Q9P244 771 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 PHF11Q9UIL8 331 aa17.22■□□□□ 0.35
SHKBP1-202ENST00000593764 WISP2O76076 250 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 OR4F21O95013 312 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 PDYNP01213 254 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 GBAP04062 536 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 FAM58BPP0C7Q3 252 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 PMP22Q01453 160 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 OC90Q02509 493 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 FOLH1Q04609 750 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 SGO1Q5FBB7 561 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 SLC22A9Q8IVM8 553 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 MORN4Q8NDC4 146 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 OR14A16Q8NHC5 309 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 DNAJB8Q8NHS0 232 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 EPS8L3Q8TE67 593 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 UCN3Q969E3 161 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 L3HYPDHQ96EM0 354 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 ELOVL6Q9H5J4 265 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 KLHL1Q9NR64 748 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 LYARQ9NX58 379 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 TRPS1Q9UHF7 1281 aa17.21■□□□□ 0.35
SHKBP1-202ENST00000593764 SPTBN1Q01082 2364 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-202ENST00000593764 SMIM23A6NLE4 172 aa17.2■□□□□ 0.34
SHKBP1-202ENST00000593764 C17orf105B2RV13 164 aa17.2■□□□□ 0.34
SHKBP1-202ENST00000593764 G3V2L1 256 aa17.2■□□□□ 0.34
SHKBP1-202ENST00000593764 ZFAND5O76080 213 aa17.2■□□□□ 0.34
SHKBP1-202ENST00000593764 AGFG2O95081 481 aa17.2■□□□□ 0.34
SHKBP1-202ENST00000593764 SP1P08047 785 aa17.2■□□□□ 0.34
SHKBP1-202ENST00000593764 RNF224P0DH78 156 aa17.2■□□□□ 0.34
SHKBP1-202ENST00000593764 MST1P26927 711 aa17.2■□□□□ 0.34
SHKBP1-202ENST00000593764 TLX1P31314 330 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-202ENST00000593764 STT3AP46977 705 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms