RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ELAVL1Q15717 326 aaKnown RBP12.29□□□□□ -0.44
H3F3B-213ENST00000593254 UAP1Q16222 522 aaPredicted RBP12.29□□□□□ -0.44
H3F3B-213ENST00000593254 TMEM35AQ53FP2 167 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 CHSY3Q70JA7 882 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 CLNKQ7Z7G1 428 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 TEX9Q8N6V9 391 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 ACOT4Q8N9L9 421 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 FAM98AQ8NCA5 519 aaKnown RBP12.29□□□□□ -0.44
H3F3B-213ENST00000593254 THAP3Q8WTV1 239 aaPredicted RBP12.29□□□□□ -0.44
H3F3B-213ENST00000593254 NCLNQ969V3 563 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 ISL2Q96A47 359 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 MTFMTQ96DP5 389 aaKnown RBP12.29□□□□□ -0.44
H3F3B-213ENST00000593254 CMTM7Q96FZ5 175 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 GPR137Q96N19 417 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 MAPKAP1Q9BPZ7 522 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 TSPYL1Q9H0U9 437 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 CDC42EP4Q9H3Q1 356 aaKnown RBP12.29□□□□□ -0.44
H3F3B-213ENST00000593254 ADGRE2Q9UHX3 823 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 SH3BGRL2Q9UJC5 107 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 TSC22D4Q9Y3Q8 395 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 AKAP6Q13023 2319 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 FLNAP21333 2647 aaKnown RBP12.29□□□□□ -0.44
H3F3B-213ENST00000593254 PRRC2AP48634 2157 aaKnown RBP12.28□□□□□ -0.44
H3F3B-213ENST00000593254 INTS1Q8N201 2190 aaKnown RBP12.28□□□□□ -0.44
H3F3B-213ENST00000593254 RTCAO00442 366 aaKnown RBP12.28□□□□□ -0.44
H3F3B-213ENST00000593254 CLDN14O95500 239 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 MLYCDO95822 493 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 TGFB1P01137 390 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 PCNAP12004 261 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 GFAPP14136 432 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 HIST1H1TP22492 207 aaPredicted RBP12.28□□□□□ -0.44
H3F3B-213ENST00000593254 TYK2P29597 1187 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 ECHS1P30084 290 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 PIK3CBP42338 1070 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 MAGEA12P43365 314 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 ALDH6A1Q02252 535 aaKnown RBP12.28□□□□□ -0.44
H3F3B-213ENST00000593254 TLE4Q04727 773 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 RBPJQ06330 500 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 PCBP2Q15366 365 aaKnown RBP eCLIP12.28□□□□□ -0.441e-6■■■□□ 15.4
H3F3B-213ENST00000593254 MAPKAPK3Q16644 382 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 PFKFB4Q16877 469 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 AP5B1Q2VPB7 878 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 KRTCAP3Q53RY4 240 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 DEPDC1Q5TB30 811 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 KHDRBS2Q5VWX1 349 aaKnown RBP12.28□□□□□ -0.44
H3F3B-213ENST00000593254 LIPJQ5W064 366 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 KLC3Q6P597 504 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.28□□□□□ -0.44
H3F3B-213ENST00000593254 SIAH3Q8IW03 269 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 TMEM132CQ8N3T6 1108 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 SLC44A1Q8WWI5 657 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 FMO2Q99518 471 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 TREX2Q9BQ50 279 aaPredicted RBP12.28□□□□□ -0.44
H3F3B-213ENST00000593254 ENKD1Q9H0I2 346 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 VTI1BQ9UEU0 232 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 FBXW2Q9UKT8 454 aa12.28□□□□□ -0.44
H3F3B-213ENST00000593254 LRRC14BA6NHZ5 514 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 TMEM200CA6NKL6 621 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 NPIPA5E9PKD4 350 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 PRKNO60260 465 aaPredicted RBP12.27□□□□□ -0.45
H3F3B-213ENST00000593254 UGDHO60701 494 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 SLC19A2O60779 497 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 LDB3O75112 727 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 SH3BGRLO75368 114 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 ITGA10O75578 1167 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 ACSL3O95573 720 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 INHBAP08476 426 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 SSR2P43308 183 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 SMSP52788 366 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 STX4Q12846 297 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 SERTAD2Q14140 314 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 C3AR1Q16581 482 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 GLE1Q53GS7 698 aaKnown RBP12.27□□□□□ -0.45
H3F3B-213ENST00000593254 TECRLQ5HYJ1 363 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 METTL2BQ6P1Q9 378 aaKnown RBP12.27□□□□□ -0.45
H3F3B-213ENST00000593254 MYLK4Q86YV6 388 aaPredicted RBP12.27□□□□□ -0.45
H3F3B-213ENST00000593254 PLD6Q8N2A8 252 aaKnown RBP12.27□□□□□ -0.45
H3F3B-213ENST00000593254 RNF175Q8N4F7 328 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 MNS1Q8NEH6 495 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 OR14A16Q8NHC5 309 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 HUS1BQ8NHY5 278 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 PTPMT1Q8WUK0 201 aaPredicted RBP12.27□□□□□ -0.45
H3F3B-213ENST00000593254 ZNF592Q92610 1267 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 DAZLQ92904 295 aaKnown RBP12.27□□□□□ -0.45
H3F3B-213ENST00000593254 TMEM125Q96AQ2 219 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 PAFAH2Q99487 392 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 CCDC77Q9BR77 488 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 ALOXE3Q9BYJ1 711 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 TSPAN10Q9H1Z9 355 aaPredicted RBP12.27□□□□□ -0.45
H3F3B-213ENST00000593254 OR51B5Q9H339 312 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 ACTR8Q9H981 624 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 DMRT3Q9NQL9 472 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 NPIPA1Q9UND3 350 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 ZNF835Q9Y2P0 537 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 KLF13Q9Y2Y9 288 aaPredicted RBP12.27□□□□□ -0.45
H3F3B-213ENST00000593254 ANGPTL3Q9Y5C1 460 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 PCDHGA11Q9Y5H2 935 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 TNPO3Q9Y5L0 923 aaKnown RBP12.27□□□□□ -0.45
H3F3B-213ENST00000593254 CLCA3PQ9Y6N3 262 aa12.27□□□□□ -0.45
H3F3B-213ENST00000593254 SPACA6W5XKT8 324 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms