RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 KCNE4Q8WWG9 221 aa16.09■□□□□ 0.17
RPRD1A-209ENST00000590898 TM4SF18Q96CE8 201 aa16.09■□□□□ 0.17
RPRD1A-209ENST00000590898 SPSB2Q99619 263 aa16.09■□□□□ 0.17
RPRD1A-209ENST00000590898 MRPS33Q9Y291 106 aaKnown RBP16.09■□□□□ 0.17
RPRD1A-209ENST00000590898 ATG4BQ9Y4P1 393 aa16.09■□□□□ 0.17
RPRD1A-209ENST00000590898 LBPP18428 481 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 ERVK-8P63133 956 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 RPL38P63173 70 aaKnown RBP16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 RINLQ6ZS11 566 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 ZC3H7AQ8IWR0 971 aaKnown RBP16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 ZNF595Q8IYB9 648 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 ENDOVQ8N8Q3 282 aaKnown RBP16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 FNDC5Q8NAU1 212 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 C7orf57Q8NEG2 295 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 OR2Y1Q8NGV0 311 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.08■□□□□ 0.164e-6■■□□□ 11.9
RPRD1A-209ENST00000590898 NACC2Q96BF6 587 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 LRMDAQ9H2I8 198 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 GPN2Q9H9Y4 310 aaPredicted RBP16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 ASIC5Q9NY37 505 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 FBXW2Q9UKT8 454 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 TCFL5Q9UL49 500 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 SSUH2Q9Y2M2 353 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 IGF2RP11717 2491 aa16.08■□□□□ 0.16
RPRD1A-209ENST00000590898 TMEM8BA6NDV4 472 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 CLDN4O14493 209 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 CNOT3O75175 753 aaKnown RBP16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 ESRRAP11474 423 aaPredicted RBP16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 PRPS2P11908 318 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 CPN2P22792 545 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 ZNF763Q0D2J5 394 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 PLPP5Q8NEB5 264 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 CCDC28BQ9BUN5 200 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 ZNF385DQ9H6B1 395 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 WDR41Q9HAD4 459 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 LANCL2Q9NS86 450 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 EIF3LQ9Y262 564 aaKnown RBP16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 POLR3HQ9Y535 204 aaPredicted RBP16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 ANKRD11Q6UB99 2663 aaPredicted RBP16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 TPRP12270 2363 aaKnown RBP16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 A0A1W2PR48 441 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 PCDH17O14917 1159 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 KRT16P08779 473 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 BCKDHAP12694 445 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 DRD2P14416 443 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 CALB2P22676 271 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 F8A1P23610 371 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 EIF2S3P41091 472 aaKnown RBP16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 HSD17B7P56937 341 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 TNFRSF17Q02223 184 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 KLC1Q07866 573 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 SPATA19Q7Z5L4 167 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 C10orf67Q8IYJ2 551 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 FAM9CQ8IZT9 166 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 EFCAB3Q8N7B9 438 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 C16orf78Q8WTQ4 265 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 TANKQ92844 425 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 UTP4Q969X6 686 aaKnown RBP16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 FAIM2Q9BWQ8 316 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 RPF2Q9H7B2 306 aaKnown RBP16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 NOP53Q9NZM5 478 aaKnown RBP16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 DLGAP4Q9Y2H0 992 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 MMACHCQ9Y4U1 282 aa16.07■□□□□ 0.16
RPRD1A-209ENST00000590898 C1orf226A1L170 272 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 SYNDIG1LA6NDD5 238 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 C1QTNF9BB2RNN3 333 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 ATP5HO75947 161 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 C1QTNF9P0C862 333 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 ASMTP46597 345 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 KLF10Q13118 480 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 BIKQ13323 160 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 SSPNQ14714 243 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 HEPACAMQ14CZ8 416 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 NDUFAF5Q5TEU4 345 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 IL23RQ5VWK5 629 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 METTL21CQ5VZV1 264 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 QSOX2Q6ZRP7 698 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 IKBIPQ70UQ0 350 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 LAPTM4BQ86VI4 370 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 SLC45A3Q96JT2 553 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 MYNNQ9NPC7 610 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 TAGLN3Q9UI15 199 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 PTRH2Q9Y3E5 179 aaKnown RBP16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 COPG1Q9Y678 874 aaKnown RBP16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 FAM227AF5H4B4 570 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 RRP8O43159 456 aaKnown RBP16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 CTNSO60931 367 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 IGHEP01854 428 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 LIFP15018 202 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 NQO1P15559 274 aaKnown RBP16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 TAS2R50P59544 299 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 ERV3-1Q14264 604 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 SHISA5Q8N114 240 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 EBPLQ9BY08 206 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 ACTL8Q9H568 366 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 SEMA3GQ9NS98 782 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 TEX10Q9NXF1 929 aaPredicted RBP16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 MKL2Q9ULH7 1088 aa16.06■□□□□ 0.16
RPRD1A-209ENST00000590898 LAMA5O15230 3695 aa16.05■□□□□ 0.16
RPRD1A-209ENST00000590898 LOC100653049A0A140TA62 436 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms