RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 SLC9B1P1A6NJY1 282 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 CXCR6O00574 342 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 PROM1O43490 865 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 DUX1O43812 170 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 B3GALT2O43825 422 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 PRAMEF10O60809 474 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 KRT75O95678 551 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 RETP07949 1114 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 NR2F6P10588 404 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 NCK1P16333 377 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 HOXB6P17509 224 aaKnown RBP11.42□□□□□ -0.58
CCBE1-203ENST00000589116 IL10P22301 178 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 UQCRC2P22695 453 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 NTSP30990 170 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 BUD31P41223 144 aaPredicted RBP11.42□□□□□ -0.58
CCBE1-203ENST00000589116 MANFP55145 182 aaKnown RBP11.42□□□□□ -0.58
CCBE1-203ENST00000589116 VAC14Q08AM6 782 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 NIPAL1Q6NVV3 410 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 SLC48A1Q6P1K1 146 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 ADGRG5Q8IZF4 528 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 DNAJC22Q8N4W6 341 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 SUMF1Q8NBK3 374 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 OR52N2Q8NGI0 321 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 PSMA8Q8TAA3 256 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 CANT1Q8WVQ1 401 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 NRG4Q8WWG1 115 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 EXOSC8Q96B26 276 aaKnown RBP11.42□□□□□ -0.58
CCBE1-203ENST00000589116 SLCO4A1Q96BD0 722 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 AHCYL2Q96HN2 611 aaKnown RBP11.42□□□□□ -0.58
CCBE1-203ENST00000589116 LYRM4Q9HD34 91 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 SLC35C2Q9NQQ7 365 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 RIMS3Q9UJD0 308 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 ANAPC2Q9UJX6 822 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 UTS2RQ9UKP6 389 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 FBXW2Q9UKT8 454 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 PSME2Q9UL46 239 aa11.42□□□□□ -0.58
CCBE1-203ENST00000589116 IGHV1OR21-1A0A087WYE8 117 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 HNRNPRO43390 633 aaKnown RBP11.41□□□□□ -0.58
CCBE1-203ENST00000589116 EIF2S1P05198 315 aaKnown RBP11.41□□□□□ -0.58
CCBE1-203ENST00000589116 FCGR1AP12314 374 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 PNLIPP16233 465 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 ALDH4A1P30038 563 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 PPM1FP49593 454 aaPredicted RBP11.41□□□□□ -0.58
CCBE1-203ENST00000589116 VSX2P58304 361 aaPredicted RBP11.41□□□□□ -0.58
CCBE1-203ENST00000589116 SKP1P63208 163 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 TNFRSF17Q02223 184 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 VEZF1Q14119 521 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 RGNQ15493 299 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 VMACQ2NL98 169 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 DEFB134Q4QY38 66 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 FAM92BQ6ZTR7 304 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 ZNF551Q7Z340 670 aaPredicted RBP11.41□□□□□ -0.58
CCBE1-203ENST00000589116 PLXDC1Q8IUK5 500 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 MCATQ8IVS2 390 aaKnown RBP11.41□□□□□ -0.58
CCBE1-203ENST00000589116 ZZZ3Q8IYH5 903 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 SAMD14Q8IZD0 417 aaPredicted RBP11.41□□□□□ -0.58
CCBE1-203ENST00000589116 C10orf111Q8N326 155 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 ZBTB44Q8NCP5 570 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 PAPD5Q8NDF8 572 aaKnown RBP11.41□□□□□ -0.58
CCBE1-203ENST00000589116 OR4C6Q8NH72 309 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 SAP25Q8TEE9 199 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 FIG4Q92562 907 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 MAPKAP1Q9BPZ7 522 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 NPLQ9BXD5 320 aaPredicted RBP11.41□□□□□ -0.58
CCBE1-203ENST00000589116 TRIM4Q9C037 500 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 CHST8Q9H2A9 424 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 CAPN10Q9HC96 672 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 FAM60AQ9NP50 221 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 SLAMF7Q9NQ25 335 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 GIMAP4Q9NUV9 329 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 OLAHQ9NV23 265 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 ENTPD4Q9Y227 616 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 SPACA6W5XKT8 324 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 FAM208BQ5VWN6 2430 aa11.41□□□□□ -0.58
CCBE1-203ENST00000589116 MN1Q10571 1320 aaPredicted RBP11.4□□□□□ -0.58
CCBE1-203ENST00000589116 SH3BP5O60239 455 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 GALR3O60755 368 aaPredicted RBP11.4□□□□□ -0.58
CCBE1-203ENST00000589116 CREG1O75629 220 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 KCNK5O95279 499 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 ZBTB11O95625 1053 aaPredicted RBP11.4□□□□□ -0.58
CCBE1-203ENST00000589116 C9P02748 559 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 CFIP05156 583 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 IL1RNP18510 177 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 CPN2P22792 545 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 TLX1P31314 330 aaPredicted RBP11.4□□□□□ -0.58
CCBE1-203ENST00000589116 SOAT1P35610 550 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 CHI3L1P36222 383 aaPredicted RBP11.4□□□□□ -0.58
CCBE1-203ENST00000589116 MLLT3P42568 568 aaPredicted RBP11.4□□□□□ -0.58
CCBE1-203ENST00000589116 CCT8P50990 548 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 GFERP55789 205 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 RBBP4Q09028 425 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 TRIP10Q15642 601 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 CEBPEQ15744 281 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 PRTGQ2VWP7 1150 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 HLA-BQ31612 363 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 TBCELQ5QJ74 424 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 PIAS4Q8N2W9 510 aaPredicted RBP11.4□□□□□ -0.58
CCBE1-203ENST00000589116 CATSPER1Q8NEC5 780 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 KLHL6Q8WZ60 621 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 NCSTNQ92542 709 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms