RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TXNL4AP83876 142 aaKnown RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 MC1RQ01726 317 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 VAC14Q08AM6 782 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 HYAL2Q12891 473 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 BIRC2Q13490 618 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 C1orf61Q13536 156 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 ELOAQ14241 798 aaKnown RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 SUZ12Q15022 739 aaKnown RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 GTDC1Q4AE62 458 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 ZNF385BQ569K4 471 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 MRM1Q6IN84 353 aaKnown RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 DNAJC14Q6Y2X3 702 aaPredicted RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 TMPRSS7Q7RTY8 843 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 C17orf82Q86X59 251 aaPredicted RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 PLD3Q8IV08 490 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 SAMD14Q8IZD0 417 aaPredicted RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 CLECL1Q8IZS7 167 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 PACRGLQ8N7B6 248 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 ANKFN1Q8N957 763 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 TMEM102Q8N9M5 508 aaPredicted RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 ICA1LQ8NDH6 482 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 OR52N2Q8NGI0 321 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 ZFP28Q8NHY6 868 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 LMX1AQ8TE12 382 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 TMEM131Q92545 1883 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 FIG4Q92562 907 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 FAM162AQ96A26 154 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 RERGQ96A58 199 aaPredicted RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 PPWD1Q96BP3 646 aaKnown RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 ZBED6CLQ96FA7 236 aaPredicted RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 CENPNQ96H22 339 aaPredicted RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 OR2A5Q96R48 311 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 CDC6Q99741 560 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 PKP2Q99959 881 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 ZFYVE21Q9BQ24 234 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 RPF2Q9H7B2 306 aaKnown RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 NEUROD4Q9HD90 331 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 LHX9Q9NQ69 397 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 DCAF13Q9NV06 445 aaKnown RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 MS4A12Q9NXJ0 267 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 PILRAQ9UKJ1 303 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 AURKCQ9UQB9 309 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 LRCH1Q9Y2L9 728 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 DTNAQ9Y4J8 743 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 LRP4O75096 1905 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 RTCAO00442 366 aaKnown RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 YY2O15391 372 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 PDPK1O15530 556 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 TMPRSS11DO60235 418 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 PCDHGA12O60330 932 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 C6orf47O95873 294 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 SMIM10L1P0DMW3 83 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 RAP2AP10114 183 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 NCK1P16333 377 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 CTSKP43235 329 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 RXRGP48443 463 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 EPHA4P54764 986 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 MANFP55145 182 aaKnown RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 HBA1P69905 142 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 SLAMF1Q13291 335 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 COL9A2Q14055 689 aaPredicted RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 RGNQ15493 299 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 VMACQ2NL98 169 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 GRAMD1BQ3KR37 738 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 ZC3H12BQ5HYM0 836 aaKnown RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 INTS11Q5TA45 600 aaKnown RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 FCRL6Q6DN72 434 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 ANKRD26P1Q6NSI1 321 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 NIPAL1Q6NVV3 410 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 ZCCHC8Q6NZY4 707 aaKnown RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 C19orf48Q6RUI8 117 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 IZUMO2Q6UXV1 221 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 ABHD13Q7L211 337 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 GPR155Q7Z3F1 870 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 PDSS2Q86YH6 399 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 LILRA2Q8N149 483 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 ARL14Q8N4G2 192 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 ACOT4Q8N9L9 421 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 OR10G6Q8NH81 332 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 PSMA8Q8TAA3 256 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 JPH3Q8WXH2 748 aaPredicted RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 SMIM10Q96HG1 83 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 RNF145Q96MT1 663 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 TEFMQ96QE5 360 aaKnown RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 SERINC2Q96SA4 455 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 C17orf62Q9BQA9 187 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 BDH2Q9BUT1 245 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 SORBS1Q9BX66 1292 aaKnown RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 TRIM8Q9BZR9 551 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 CHRNA10Q9GZZ6 450 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 SEMA6CQ9H3T2 930 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 EPB41L1Q9H4G0 881 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 Q9H521 79 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 IKZF5Q9H5V7 419 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 PIF1Q9H611 641 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 CCDC86Q9H6F5 360 aaKnown RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 SLC6A13Q9NSD5 602 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 GIMAP4Q9NUV9 329 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 THUMPD1Q9NXG2 353 aaKnown RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 GMPR2Q9P2T1 348 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms