RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 TPP2P29144 1249 aaPredicted RBP15.06■□□□□ 0
CSNK1D-223ENST00000584472 TIA1P31483 386 aaKnown RBP eCLIP15.06■□□□□ 0
CSNK1D-223ENST00000584472 RPL38P63173 70 aaKnown RBP15.06■□□□□ 0
CSNK1D-223ENST00000584472 NFATC3Q12968 1075 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 KCNAB2Q13303 367 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 SMU1Q2TAY7 513 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 NOXRED1Q6NXP6 359 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 ACTRT2Q8TDY3 377 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 MIEF2Q96C03 454 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 NPLQ9BXD5 320 aaPredicted RBP15.06■□□□□ 0
CSNK1D-223ENST00000584472 EPN3Q9H201 632 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 CLK4Q9HAZ1 481 aaKnown RBP15.06■□□□□ 0
CSNK1D-223ENST00000584472 SEMA3GQ9NS98 782 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 KLHL14Q9P2G3 628 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 MCM8Q9UJA3 840 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 TMED5Q9Y3A6 229 aa15.06■□□□□ 0
CSNK1D-223ENST00000584472 POLR3HQ9Y535 204 aaPredicted RBP15.06■□□□□ 0
CSNK1D-223ENST00000584472 SCN2AQ99250 2005 aa15.05■□□□□ 0
CSNK1D-223ENST00000584472 A0A0G2JND7 137 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 B3GALT2O43825 422 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 SLC28A2O43868 658 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 TMPRSS11DO60235 418 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 PCDH7O60245 1069 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 DNAJB6O75190 326 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 RDH16O75452 317 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 MYO1DO94832 1006 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 CYC1P08574 325 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 LBPP18428 481 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 MMP11P24347 488 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 OTX2P32243 289 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 ERVK-8P63133 956 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 OLR1P78380 273 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 EMX2Q04743 252 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 KLC1Q07866 573 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 SLAMF1Q13291 335 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 RUNX2Q13950 521 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 LSM12Q3MHD2 195 aaKnown RBP15.05■□□□□ -0
CSNK1D-223ENST00000584472 CCNYL2Q5T2Q4 361 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 MRM1Q6IN84 353 aaKnown RBP15.05■□□□□ -0
CSNK1D-223ENST00000584472 OGFOD2Q6N063 350 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 ACAD11Q709F0 780 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 PPP1R32Q7Z5V6 425 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 CPLX4Q7Z7G2 160 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 FNDC5Q8NAU1 212 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 OR5T3Q8NGG3 340 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 CEP70Q8NHQ1 597 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 CRB3Q9BUF7 120 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 CCDC28BQ9BUN5 200 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 EBPLQ9BY08 206 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 FAM107BQ9H098 131 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 TCF7L2Q9NQB0 619 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 NUP210LQ5VU65 1888 aa15.05■□□□□ -0
CSNK1D-223ENST00000584472 ARHGAP10A1A4S6 786 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 PEX12O00623 359 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 PCDH17O14917 1159 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 ACPPP15309 386 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 IL10P22301 178 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 ARFIP2P53365 341 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 RRADP55042 308 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 MAT1AQ00266 395 aaKnown RBP15.04■□□□□ -0
CSNK1D-223ENST00000584472 SF3A3Q12874 501 aaKnown RBP eCLIP15.04■□□□□ -04e-13■■■■□ 21.5
CSNK1D-223ENST00000584472 MAD2L1Q13257 205 aaPredicted RBP15.04■□□□□ -0
CSNK1D-223ENST00000584472 ATP1A4Q13733 1029 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 NXNQ6DKJ4 435 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 CYP20A1Q6UW02 462 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 MED25Q71SY5 747 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 ZC3H7AQ8IWR0 971 aaKnown RBP15.04■□□□□ -0
CSNK1D-223ENST00000584472 CA13Q8N1Q1 262 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 TMEM102Q8N9M5 508 aaPredicted RBP15.04■□□□□ -0
CSNK1D-223ENST00000584472 VPS50Q96JG6 964 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 ELAC2Q9BQ52 826 aaKnown RBP15.04■□□□□ -0
CSNK1D-223ENST00000584472 C1orf50Q9BV19 199 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 YIPF2Q9BWQ6 316 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 TMEM120AQ9BXJ8 343 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 SOX17Q9H6I2 414 aaPredicted RBP15.04■□□□□ -0
CSNK1D-223ENST00000584472 LYRM4Q9HD34 91 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 HCN3Q9P1Z3 774 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 DAPP1Q9UN19 280 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 DLGAP4Q9Y2H0 992 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 MYO18BQ8IUG5 2567 aa15.04■□□□□ -0
CSNK1D-223ENST00000584472 GNG14A0A1W2PPG7 69 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 CHST10O43529 356 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 BMP10O95393 424 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 ANXA4P09525 319 aaPredicted RBP15.03■□□□□ -0
CSNK1D-223ENST00000584472 ALDOCP09972 364 aaKnown RBP15.03■□□□□ -0
CSNK1D-223ENST00000584472 FAM58BPP0C7Q3 252 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 SDC1P18827 310 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 MAPK12P53778 367 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 LIM2P55344 173 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 HNRNPH2P55795 449 aaKnown RBP15.03■□□□□ -0
CSNK1D-223ENST00000584472 FOXL2P58012 376 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 TRA2BP62995 288 aaKnown RBP15.03■□□□□ -0
CSNK1D-223ENST00000584472 SYT16Q17RD7 645 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 VWA2Q5GFL6 755 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 IL23RQ5VWK5 629 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 SHISA6Q6ZSJ9 500 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 SPATA21Q7Z572 469 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 SPATA19Q7Z5L4 167 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 PARP9Q8IXQ6 854 aa15.03■□□□□ -0
CSNK1D-223ENST00000584472 SHISA5Q8N114 240 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms