RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 LIX1LQ8IVB5 337 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 AFAP1L2Q8N4X5 818 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 PDPRQ8NCN5 879 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 PIWIL2Q8TC59 973 aaKnown RBP10.76□□□□□ -0.69
NUP85-224ENST00000583948 NINJ1Q92982 152 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 ESAMQ96AP7 390 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 LINC00615Q96LM1 132 aaPredicted RBP10.76□□□□□ -0.69
NUP85-224ENST00000583948 FOPNLQ96NB1 174 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 NSUN5Q96P11 429 aaKnown RBP10.76□□□□□ -0.69
NUP85-224ENST00000583948 PLCD4Q9BRC7 762 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 MVB12BQ9H7P6 319 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 PARVBQ9HBI1 364 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 ZNF304Q9HCX3 659 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 ARL15Q9NXU5 204 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 KCNN3Q9UGI6 736 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 USH1CQ9Y6N9 552 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 IFRD1O00458 451 aaPredicted RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 SLC16A5O15375 505 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 CATP04040 527 aaKnown RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 RPS17P08708 135 aaKnown RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 ANXA5P08758 320 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 ENO2P09104 434 aaPredicted RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 HIST1H2AGP0C0S8 130 aaPredicted RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 HIST1H2ADP20671 130 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 PSMB5P28074 263 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 ARL1P40616 181 aaPredicted RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 HSPA7P48741 367 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 RPL14P50914 215 aaKnown RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 ARSFP54793 590 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 NUP107P57740 925 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 MAT1AQ00266 395 aaKnown RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 OCA2Q04671 838 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 PMPCAQ10713 525 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 IFT88Q13099 833 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 OR1C1Q15619 314 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 KRTCAP3Q53RY4 240 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 SULT1C3Q6IMI6 304 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 SLC22A15Q8IZD6 547 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 MCOLN3Q8TDD5 553 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 TRPC4APQ8TEL6 797 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 ASB11Q8WXH4 323 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 HIST1H2AHQ96KK5 128 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 C10orf90Q96M02 699 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 HIST1H2AJQ99878 128 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 H2AFJQ9BTM1 129 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 TRMOQ9BU70 441 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 CLEC4MQ9H2X3 399 aaPredicted RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 KCNJ16Q9NPI9 418 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 SEMA4BQ9NPR2 832 aaPredicted RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 ZNF282Q9UDV7 671 aaPredicted RBP10.75□□□□□ -0.69
NUP85-224ENST00000583948 ZDHHC2Q9UIJ5 367 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 PCTPQ9UKL6 214 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 PDE10AQ9Y233 779 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 ASF1AQ9Y294 204 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 L3MBTL1Q9Y468 752 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 ANGPTL3Q9Y5C1 460 aa10.75□□□□□ -0.69
NUP85-224ENST00000583948 A0A0J9YVX5 310 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 HYKKA2RU49 373 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 ASPDHA6ND91 283 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 ARHGEF33A8MVX0 844 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 TMEM233B4DJY2 109 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 PRRG2O14669 202 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 CDC40O60508 579 aaKnown RBP eCLIP10.74□□□□□ -0.69
NUP85-224ENST00000583948 CCNT2O60583 730 aaKnown RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 CRCPO75575 148 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 SNUPNO95149 360 aaKnown RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 STATHP02808 62 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 PIM1P11309 404 aaPredicted RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 SHMT2P34897 504 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 PLOD1Q02809 727 aaPredicted RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 CLCQ05315 142 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 PDCD2Q16342 344 aaPredicted RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 EMC4Q5J8M3 183 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 ACER2Q5QJU3 275 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 FIGLAQ6QHK4 219 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 PHC2Q8IXK0 858 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 GHDCQ8N2G8 530 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 ZNF483Q8TF39 744 aaPredicted RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 RMND5BQ96G75 393 aaPredicted RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 SCMH1Q96GD3 660 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 PPP1R36Q96LQ0 422 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 IMMP1LQ96LU5 166 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 RILPQ96NA2 401 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 ALPK1Q96QP1 1244 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 SIKE1Q9BRV8 207 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 TMEM79Q9BSE2 394 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 RNF32Q9H0A6 362 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 KCNK13Q9HB14 408 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 MID1IP1Q9NPA3 183 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 ABCF3Q9NUQ8 709 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 OPTCQ9UBM4 332 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 TRPC4Q9UBN4 977 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 PTBP2Q9UKA9 531 aaKnown RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 NXT1Q9UKK6 140 aaKnown RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 TNPO3Q9Y5L0 923 aaKnown RBP10.74□□□□□ -0.69
NUP85-224ENST00000583948 DNAJC13O75165 2243 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 ZNF407Q9C0G0 2248 aa10.74□□□□□ -0.69
NUP85-224ENST00000583948 MPDZO75970 2070 aa10.73□□□□□ -0.69
NUP85-224ENST00000583948 SLCO1B7G3V0H7 640 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms