RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	ATP6AP2	O75787	350 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	GLS	O94925	669 aa	Predicted RBP	14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	ETHE1	O95571	254 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732		P04436	131 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	EPOR	P19235	508 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	CNR1	P21554	472 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	CPN2	P22792	545 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	ATP5A1	P25705	553 aa	Known RBP	14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	ACVR2A	P27037	513 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	GGT5	P36269	586 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	SSR2	P43308	183 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	ASPH	Q12797	758 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	SERTAD2	Q14140	314 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	HIST2H2AC	Q16777	129 aa	Predicted RBP	14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	PAGE2B	Q5JRK9	111 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	NDUFAF5	Q5TEU4	345 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	HIST2H2AA3	Q6FI13	130 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	RGS9BP	Q6ZS82	235 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	DMRTC2	Q8IXT2	367 aa	Predicted RBP	14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	FAM109A	Q8N4B1	249 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	ACOT4	Q8N9L9	421 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	NRGN	Q92686	78 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	KIAA1191	Q96A73	305 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	KRT12	Q99456	494 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	SORBS1	Q9BX66	1292 aa	Known RBP	14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	MS4A8	Q9BY19	250 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	DPH5	Q9H2P9	285 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	KCNF1	Q9H3M0	494 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	LDAH	Q9H6V9	325 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	IL1RL2	Q9HB29	575 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	LYRM4	Q9HD34	91 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	SAYSD1	Q9NPB0	183 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	SACM1L	Q9NTJ5	587 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	COPS7A	Q9UBW8	275 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	SPACA6	W5XKT8	324 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	CCDC168	Q8NDH2	2452 aa		14.01	□□□□□ -0.17
SREBF1-222	ENST00000583732	DNAJC13	O75165	2243 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	SYNDIG1L	A6NDD5	238 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	FIGNL2	A6NMB9	653 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	BCKDK	O14874	412 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	FGF17	O60258	216 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	TGFB1	P01137	390 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	STMN1	P16949	149 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	PIGA	P37287	484 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	MAN2A2	P49641	1150 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	ATP6V0D1	P61421	351 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	LAPTM5	Q13571	262 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	DDX39B	Q13838	428 aa	Known RBP	14	□□□□□ -0.17
SREBF1-222	ENST00000583732	OPN5	Q6U736	354 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	B3GNT6	Q6ZMB0	384 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	SPNS3	Q6ZMD2	512 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	TRIL	Q7L0X0	811 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	RNF175	Q8N4F7	328 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	PDPR	Q8NCN5	879 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	OR5L2	Q8NGL0	311 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	ZNF721	Q8TF20	911 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	ZNF473	Q8WTR7	871 aa	Known RBP	14	□□□□□ -0.17
SREBF1-222	ENST00000583732	PYROXD1	Q8WU10	500 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	CDKL2	Q92772	493 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	ANKRD9	Q96BM1	317 aa	Predicted RBP	14	□□□□□ -0.17
SREBF1-222	ENST00000583732	WDR34	Q96EX3	536 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	DGAT2	Q96PD7	388 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	RBBP8	Q99708	897 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	TTYH2	Q9BSA4	534 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	ROGDI	Q9GZN7	287 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	SEMA4B	Q9NPR2	832 aa	Predicted RBP	14	□□□□□ -0.17
SREBF1-222	ENST00000583732	ALKBH4	Q9NXW9	302 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	ACAD8	Q9UKU7	415 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	ATG4B	Q9Y4P1	393 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	FAM215A	Q9Y5M1	114 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732	HIVEP1	P15822	2718 aa		14	□□□□□ -0.17
SREBF1-222	ENST00000583732		A0A0G2JNJ9	132 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	OR14I1	A6ND48	311 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	SUPT3H	B4E1H0	165 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	CCDC188	H7C350	402 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	KLK8	O60259	260 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	DIAPH2	O60879	1101 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	SUPT3H	O75486	399 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	PRKRA	O75569	313 aa	Known RBP	13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	LRAT	O95237	230 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	IGHG3	P01860	377 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	HOXD4	P09016	255 aa	Predicted RBP	13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	GLI4	P10075	376 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	COX7A2	P14406	83 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	HIST1H1T	P22492	207 aa	Predicted RBP	13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	ART1	P52961	327 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	GNG11	P61952	73 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	AP5B1	Q2VPB7	878 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	PRAMEF20	Q5VT98	475 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	DGAT2L6	Q6ZPD8	337 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	LRRC70	Q7Z2Q7	622 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	GOLM1	Q8NBJ4	401 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	SRFBP1	Q8NEF9	429 aa	Known RBP	13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	OR8K3	Q8NH51	312 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	PPWD1	Q96BP3	646 aa	Known RBP	13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	GPR22	Q99680	433 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	TBCD	Q9BTW9	1192 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	CNPPD1	Q9BV87	410 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	CD244	Q9BZW8	370 aa		13.99	□□□□□ -0.17
SREBF1-222	ENST00000583732	PHACTR1	Q9C0D0	580 aa		13.99	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms