RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 DLGAP2Q9P1A6 1054 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CACNG5Q9UF02 275 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 ANGPTL2Q9UKU9 493 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 ASTN2O75129 1339 aaPredicted RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CLUHO75153 1309 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 TAF1LQ8IZX4 1826 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 GOLGA8IPA6NC78 632 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 OR5K3A6NET4 321 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SDR42E2A6NKP2 422 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 GOLGA8JA6NMD2 632 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 TMEM178BH3BS89 294 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 HS3ST1O14792 307 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CHMP2AO43633 222 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 BUD23O43709 281 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM189A1O60320 539 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CSPG5O95196 566 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 KLHL2O95198 593 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 LSM8O95777 96 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 TSHBP01222 138 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 GH2P01242 217 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 HLA-DRAP01903 254 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 EIF2S1P05198 315 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 ICAM1P05362 532 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SNRPAP09012 282 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 HOXB5P09067 269 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 PABPC4LP0CB38 370 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 ZSCAN5DPP0CG00 497 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 ETS1P14921 441 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 ANPEPP15144 967 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CDH2P19022 906 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 AOC1P19801 751 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 KDELR1P24390 212 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SSTR1P30872 391 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CDAP32320 146 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 RPL22P35268 128 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CPOXP36551 454 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 MAGEA6P43360 314 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 PPP5CP53041 499 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 RAD23AP54725 363 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CDH8P55286 799 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 ACTR3P61158 418 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 NOP14P78316 857 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 OLR1P78380 273 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 MBTD1Q05BQ5 628 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SPP2Q13103 211 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 IKQ13123 557 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CUL2Q13617 745 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CUL3Q13618 768 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 TFDP1Q14186 410 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 RCN2Q14257 317 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 FASTKD3Q14CZ7 662 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 RCN1Q15293 331 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SHROOM1Q2M3G4 852 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 FKBP1CQ5VVH2 108 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 GARNL3Q5VVW2 1013 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CDC73Q6P1J9 531 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CHST9Q7L1S5 443 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 PRUNE1Q86TP1 453 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SLC26A11Q86WA9 606 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 TMEM126BQ8IUX1 230 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SPAG16Q8N0X2 631 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 PDIK1LQ8N165 341 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 TMCO5AQ8N6Q1 288 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SLC4A11Q8NBS3 891 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 TMEM35BQ8NCS4 154 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 MCUQ8NE86 351 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM151AQ8WW52 585 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 LZICQ8WZA0 190 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 MCUR1Q96AQ8 359 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 PHF21AQ96BD5 680 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 CCDC127Q96BQ5 260 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 INTS12Q96CB8 462 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 LRRC39Q96DD0 335 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 OXNAD1Q96HP4 312 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM210AQ96ND0 272 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 FNBP1Q96RU3 617 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 ACOX2Q99424 681 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 PAFAH2Q99487 392 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF184Q99676 751 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 OPRPNQ99935 248 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 ECSITQ9BQ95 431 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 PSD2Q9BQI7 771 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 HGH1Q9BTY7 390 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SPATA16Q9BXB7 569 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 KLHL4Q9C0H6 718 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 LHX5Q9H2C1 402 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 VCX3BQ9H321 246 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM96AQ9H5X1 160 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SLC28A3Q9HAS3 691 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 VCX3AQ9NNX9 186 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 DNAJC17Q9NVM6 304 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 INTS10Q9NVR2 710 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 ADPRHL2Q9NX46 363 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 SLC17A7Q9P2U7 560 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 MRPS28Q9Y2Q9 187 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 PLLPQ9Y342 182 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 TEX264Q9Y6I9 313 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 COMMD3-BMI1R4GMX3 469 aa3.67□□□□□ -1.82
SMCHD1-208ENST00000583344 RGPD3A6NKT7 1758 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 RGPD4Q7Z3J3 1758 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms