RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 EPYCQ99645 322 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 SOX17Q9H6I2 414 aaPredicted RBP21.5■■□□□ 1.03
CCDC47-204ENST00000582252 TEX10Q9NXF1 929 aaPredicted RBP21.5■■□□□ 1.03
CCDC47-204ENST00000582252 THUMPD1Q9NXG2 353 aaKnown RBP21.5■■□□□ 1.03
CCDC47-204ENST00000582252 SAMHD1Q9Y3Z3 626 aaKnown RBP21.5■■□□□ 1.03
CCDC47-204ENST00000582252 ABCA7Q8IZY2 2146 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 A6NCN8 305 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 TRIM64CA6NLI5 447 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 SH3BP5O60239 455 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 NDUFS2O75306 463 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 EML2O95834 649 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 ITGA2P17301 1181 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 IGFBP5P24593 272 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 SLC19A1P41440 591 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 EEF1A2Q05639 463 aaKnown RBP21.49■■□□□ 1.03
CCDC47-204ENST00000582252 RGS1Q08116 209 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 PRRT3Q5FWE3 981 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 NDUFAF5Q5TEU4 345 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 ABHD17CQ6PCB6 329 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 PAQR7Q86WK9 346 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 DCP2Q8IU60 420 aaKnown RBP21.49■■□□□ 1.03
CCDC47-204ENST00000582252 FAM20CQ8IXL6 584 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 SPPL2AQ8TCT8 520 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 SPACA7Q96KW9 195 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 MBOAT4Q96T53 435 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 GSDMCQ9BYG8 508 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 RUBCNLQ9H714 662 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 ANKMY1Q9P2S6 941 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 C5orf58C9J3I9 102 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 AXIN1O15169 862 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 ADAMDEC1O15204 470 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 C9P02748 559 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 ITGAMP11215 1152 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 MAGEA8P43361 318 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 HYAL2Q12891 473 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 HSPB3Q12988 150 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 RBM48Q5RL73 367 aaKnown RBP21.49■■□□□ 1.03
CCDC47-204ENST00000582252 CEACAM20Q6UY09 585 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 ZNF793Q6ZN11 406 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 FAM160A2Q8N612 972 aaPredicted RBP21.49■■□□□ 1.03
CCDC47-204ENST00000582252 CCL4L1Q8NHW4 92 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 PSMA8Q8TAA3 256 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 C7orf34Q96L11 122 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 LYARQ9NX58 379 aaKnown RBP21.49■■□□□ 1.03
CCDC47-204ENST00000582252 VNN3Q9NY84 501 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 KIF17Q9P2E2 1029 aa21.49■■□□□ 1.03
CCDC47-204ENST00000582252 TMEM247A6NEH6 219 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 UGT2B11O75310 529 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 HOXA6P31267 233 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 ALDH3B2P48448 385 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 ESRRGP62508 458 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 PPP1R8Q12972 351 aaKnown RBP21.48■■□□□ 1.03
CCDC47-204ENST00000582252 SLAMF1Q13291 335 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 KCNAB2Q13303 367 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 REEP3Q6NUK4 255 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 RBM44Q6ZP01 1051 aaKnown RBP21.48■■□□□ 1.03
CCDC47-204ENST00000582252 FAM174AQ8TBP5 190 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 JPH3Q8WXH2 748 aaPredicted RBP21.48■■□□□ 1.03
CCDC47-204ENST00000582252 KLHL31Q9H511 634 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 A4GALTQ9NPC4 353 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 SLAMF7Q9NQ25 335 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 SLC35C2Q9NQQ7 365 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 PRDM7Q9NQW5 492 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 POT1Q9NUX5 634 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 DDX18Q9NVP1 670 aaKnown RBP21.48■■□□□ 1.03
CCDC47-204ENST00000582252 PCDHGB3Q9Y5G1 929 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 KNL1Q8NG31 2342 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 FANCMQ8IYD8 2048 aa21.48■■□□□ 1.03
CCDC47-204ENST00000582252 A0A0G2JN53 185 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 A0A1B0GTW7 788 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 LOC100130705A0A1B0GUX0 176 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 FAM221BA6H8Z2 402 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 OR5K4A6NMS3 321 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 SLC16A6O15403 523 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 GCM2O75603 506 aaPredicted RBP21.47■■□□□ 1.03
CCDC47-204ENST00000582252 PDE9AO76083 593 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 PRKACGP22612 351 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 ATP5A1P25705 553 aaKnown RBP21.47■■□□□ 1.03
CCDC47-204ENST00000582252 CRYBA2P53672 197 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 CASP9P55211 416 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 TOP3AQ13472 1001 aaPredicted RBP21.47■■□□□ 1.03
CCDC47-204ENST00000582252 MRM1Q6IN84 353 aaKnown RBP21.47■■□□□ 1.03
CCDC47-204ENST00000582252 ARMC8Q8IUR7 673 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 FRMD1Q8N878 549 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 ACOT4Q8N9L9 421 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 CADM4Q8NFZ8 388 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 OR13H1Q8NG92 308 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 ADAMTS16Q8TE57 1224 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 GEMIN6Q8WXD5 167 aaKnown RBP21.47■■□□□ 1.03
CCDC47-204ENST00000582252 GAL3ST3Q96A11 431 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 BBS4Q96RK4 519 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 ROGDIQ9GZN7 287 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 AICDAQ9GZX7 198 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 ABCG4Q9H172 646 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 THSD1Q9NS62 852 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 TMEFF2Q9UIK5 374 aaPredicted RBP21.47■■□□□ 1.03
CCDC47-204ENST00000582252 ZNF451Q9Y4E5 1061 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 COMMD3-BMI1R4GMX3 469 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 A0A0C4DFX4 3053 aa21.47■■□□□ 1.03
CCDC47-204ENST00000582252 SPAG17Q6Q759 2223 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms