RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 NR5A2O00482 541 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 PPP6CO00743 305 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 CFLARO15519 480 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 FKBP6O75344 327 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 NSA2O95478 260 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 NPPAP01160 153 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 STATHP02808 62 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 PRPS2P11908 318 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 ALOX12P18054 663 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 ITGAXP20702 1163 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 FBLP22087 321 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 CPOXP36551 454 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 CLNS1AP54105 237 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 SLC25A3Q00325 362 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 DDX39BQ13838 428 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 DSG2Q14126 1118 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 AP5B1Q2VPB7 878 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 TOR1AIP1Q5JTV8 583 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 C6orf136Q5SQH8 315 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 ZNF385CQ66K41 422 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 REP15Q6BDI9 236 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 TRIM40Q6P9F5 258 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 ZNF517Q6ZMY9 492 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 GK5Q6ZS86 529 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 ARHGEF39Q8N4T4 335 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 KCT2Q8NC54 265 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 HUS1BQ8NHY5 278 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 UTP4Q969X6 686 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 C3orf30Q96M34 536 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 CDK15Q96Q40 435 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 HOPXQ9BPY8 73 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 MS4A8Q9BY19 250 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 ROGDIQ9GZN7 287 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 GPN2Q9H9Y4 310 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 CLK4Q9HAZ1 481 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 LRTM1Q9HBL6 345 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 ZNF304Q9HCX3 659 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 DMRT3Q9NQL9 472 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 C1orf109Q9NX04 203 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 IFT80Q9P2H3 777 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 LEF1Q9UJU2 399 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 KCND3Q9UK17 655 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 PADI2Q9Y2J8 665 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 LRIT2A6NDA9 550 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 NPIPB8E9PQR5 432 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 FFAR3O14843 346 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 GPR42O15529 346 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 SLC22A3O75751 556 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 ONECUT2O95948 504 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 ALBP02768 609 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 ALDOCP09972 364 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 RAB40ALP0C0E4 278 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 ZNF888P0CJ79 500 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 GPX3P22352 226 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 PRPH2P23942 346 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 PTX3P26022 381 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 RPS15P62841 145 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 RPL38P63173 70 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 IGFBP7Q16270 282 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 ADPRMQ3LIE5 342 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 VN1R5Q7Z5H4 357 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 PTRH1Q86Y79 214 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 FBXW8Q8N3Y1 598 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 OR2L5Q8NG80 312 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 DNAJB8Q8NHS0 232 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 WDR20Q8TBZ3 569 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 CT55Q8WUE5 264 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 RNF31Q96EP0 1072 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 MACROD1Q9BQ69 325 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 GPR87Q9BY21 358 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 TRIM15Q9C019 465 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 REXO4Q9GZR2 422 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 CHST8Q9H2A9 424 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 BRF2Q9HAW0 419 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 SPAG4Q9NPE6 437 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 ZNF225Q9UK10 706 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 CROTQ9UKG9 612 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 NXT1Q9UKK6 140 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 GPR45Q9Y5Y3 372 aa12.75□□□□□ -0.37
CSNK1D-220ENST00000581737 A0A0A6YYC8 382 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 CCDC154A6NI56 674 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 I3L1I5 382 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 LSM1O15116 133 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 ERI3O43414 337 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 SEC22BO75396 215 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 KLHL18O94889 574 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 SEMA3DO95025 777 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 IL1RNP18510 177 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 TCN2P20062 427 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 JAK1P23458 1154 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 DLSTP36957 453 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 ARFIP1P53367 373 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 MTTPP55157 894 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 AP2B1P63010 937 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 HYAL2Q12891 473 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 DNASE1L3Q13609 305 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 ABRAXAS2Q15018 415 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 NCF4Q15080 339 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 SAMD4BQ5PRF9 694 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms