RNA–Protein interactions for RNA: ENST00000580642.2

SS18-215, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-215ENST00000580642 PAGE3Q5JUK9 113 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 OR4F3Q6IEY1 312 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 SLC2A7Q6PXP3 512 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 DLEU7Q6UYE1 221 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 DHDDSQ86SQ9 333 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 RCBTB1Q8NDN9 531 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 OR8J3Q8NGG0 315 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 PSMA8Q8TAA3 256 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 DNAJB14Q8TBM8 379 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 MCUR1Q96AQ8 359 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 GBP5Q96PP8 586 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 SERHLQ9NQF3 203 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 ZNF282Q9UDV7 671 aaPredicted RBP14.42□□□□□ -0.1
SS18-215ENST00000580642 UTS2RQ9UKP6 389 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 ENTPD4Q9Y227 616 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 MAP4K5Q9Y4K4 846 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 ZNF780BQ9Y6R6 833 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 A0A1W2PRB8 838 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 EFCAB7A8K855 629 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 MYO1GB0I1T2 1018 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 C9JVG2 144 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 TM4SF5O14894 197 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 CASC3O15234 703 aaKnown RBP14.41□□□□□ -0.1
SS18-215ENST00000580642 PDPK1O15530 556 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 RDH16O75452 317 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 SCRG1O75711 98 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 MT-CO3P00414 261 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 CYC1P08574 325 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 CEACAM1P13688 526 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 CSNK2A2P19784 350 aaPredicted RBP14.41□□□□□ -0.1
SS18-215ENST00000580642 ALDH9A1P49189 494 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 PSME3P61289 254 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 SLC25A3Q00325 362 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 C6orf10Q5SRN2 563 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 CEACAM20Q6UY09 585 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 TTLL10Q6ZVT0 673 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 ASCL5Q7RTU5 278 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 DGLUCYQ7Z3D6 616 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 B3GNT8Q7Z7M8 397 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 TMEM126BQ8IUX1 230 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 KIAA2013Q8IYS2 634 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 DEFB107AQ8IZN7 70 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 OR4K14Q8NGD5 310 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 MMABQ96EY8 250 aaPredicted RBP14.41□□□□□ -0.1
SS18-215ENST00000580642 PANX1Q96RD7 426 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 CGREF1Q99674 301 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 ASPSCR1Q9BZE9 553 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 SLC7A5P2Q9GIP4 190 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 ZNF304Q9HCX3 659 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 TAS2R9Q9NYW1 312 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 CORO2BQ9UQ03 480 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 CLCA2Q9UQC9 943 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 MMACHCQ9Y4U1 282 aa14.41□□□□□ -0.1
SS18-215ENST00000580642 CCDC187A0A096LP49 1063 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 TRBV5-3A0A0A0MS03 114 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 FXYD1O00168 92 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 CTNSO60931 367 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 MED26O95402 600 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 GPR75O95800 540 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 PGM1P36871 562 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 HSD17B7P56937 341 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 TXNL4AP83876 142 aaKnown RBP14.4□□□□□ -0.1
SS18-215ENST00000580642 ZNF385BQ569K4 471 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 SAMD4BQ5PRF9 694 aaKnown RBP14.4□□□□□ -0.1
SS18-215ENST00000580642 C18orf63Q68DL7 685 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 BNC2Q6ZN30 1099 aaPredicted RBP14.4□□□□□ -0.1
SS18-215ENST00000580642 PRSS41Q7RTY9 318 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 OR51Q1Q8NH59 317 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 MOAP1Q96BY2 351 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 TBC1D20Q96BZ9 403 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 ZNF681Q96N22 645 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 ANKRD27Q96NW4 1050 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 PELOQ9BRX2 385 aaKnown RBP14.4□□□□□ -0.1
SS18-215ENST00000580642 DDA1Q9BW61 102 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 CADM1Q9BY67 442 aaKnown RBP14.4□□□□□ -0.1
SS18-215ENST00000580642 FAM117AQ9C073 453 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 TGIF2Q9GZN2 237 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 PAIP1Q9H074 479 aaKnown RBP14.4□□□□□ -0.1
SS18-215ENST00000580642 MKKSQ9NPJ1 570 aaPredicted RBP14.4□□□□□ -0.1
SS18-215ENST00000580642 SEMA3GQ9NS98 782 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 OCIAD1Q9NX40 245 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 TMEM181Q9P2C4 612 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 ABCD2Q9UBJ2 740 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 VPS4AQ9UN37 437 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 PCDHGA7Q9Y5G6 932 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 PCDHGA3Q9Y5H0 932 aa14.4□□□□□ -0.1
SS18-215ENST00000580642 IGLV3-12A0A075B6K2 115 aa14.39□□□□□ -0.11
SS18-215ENST00000580642 PGRMC2O15173 223 aa14.39□□□□□ -0.11
SS18-215ENST00000580642 CPNE3O75131 537 aaKnown RBP14.39□□□□□ -0.11
SS18-215ENST00000580642 BMP10O95393 424 aa14.39□□□□□ -0.11
SS18-215ENST00000580642 ANP32DO95626 131 aa14.39□□□□□ -0.11
SS18-215ENST00000580642 B3GALT4O96024 378 aa14.39□□□□□ -0.11
SS18-215ENST00000580642 ALBP02768 609 aa14.39□□□□□ -0.11
SS18-215ENST00000580642 CD63P08962 238 aa14.39□□□□□ -0.11
SS18-215ENST00000580642 HOXB9P17482 250 aaPredicted RBP14.39□□□□□ -0.11
SS18-215ENST00000580642 SDHBP21912 280 aa14.39□□□□□ -0.11
SS18-215ENST00000580642 FBLP22087 321 aaKnown RBP14.39□□□□□ -0.11
SS18-215ENST00000580642 ALAS2P22557 587 aa14.39□□□□□ -0.11
SS18-215ENST00000580642 SLC6A2P23975 617 aa14.39□□□□□ -0.11
SS18-215ENST00000580642 PTPN6P29350 595 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms