RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 RGS9O75916 674 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 VENTXO95231 258 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 HPNP05981 417 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 ID2Q02363 134 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 GBX1Q14549 363 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 EXOC3L2Q2M3D2 409 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 TSTD2Q5T7W7 516 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 GABPB2Q8TAK5 448 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 SPACA9Q96E40 222 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 PGM2Q96G03 612 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 GOLPH3Q9H4A6 298 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 CCDC177Q9NQR7 707 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 CATSPERZQ9NTU4 200 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 CLCF1Q9UBD9 225 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 HEY2Q9UBP5 337 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 KCNS2Q9ULS6 477 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 MMACHCQ9Y4U1 282 aa12.75□□□□□ -0.37
CSNK1D-213ENST00000580446 ZNF839A8K0R7 811 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 TMCC2O75069 709 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 TRIM3O75382 744 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 DANCRP0C864 163 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 HSD17B2P37059 387 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 RBMXP38159 391 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 STARP49675 285 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 PRAMEP78395 509 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 CUL1Q13616 776 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 RUNX2Q13950 521 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 PIGGQ5H8A4 983 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 GRAMD2AQ8IUY3 354 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 REXO1L1PQ8IX06 675 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 ACTL9Q8TC94 416 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 ZPLD1Q8TCW7 415 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 SLC2A12Q8TD20 617 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 CTNNBL1Q8WYA6 563 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 WNT2BQ93097 391 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 PYCR2Q96C36 320 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 CSF3RQ99062 836 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 NTMT1Q9BV86 223 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 AICDAQ9GZX7 198 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 UBQLN3Q9H347 655 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 DDX56Q9NY93 547 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 NENFQ9UMX5 172 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 KMT2CQ8NEZ4 4911 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 RYR3Q15413 4870 aa12.74□□□□□ -0.37
CSNK1D-213ENST00000580446 LOC100289279A0A1B0GTE1 492 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 LRRC10BA6NIK2 292 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 ETHE1O95571 254 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 H2AFZP0C0S5 128 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 TNNI3P19429 210 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 GRIA1P42261 906 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 NUDT6P53370 316 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 LOXL1Q08397 574 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 SQLEQ14534 574 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 ELAVL1Q15717 326 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 PHKG1Q16816 387 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 PRR31Q5SQ13 230 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 CCDC181Q5TID7 509 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 FNDC7Q5VTL7 733 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 ABHD17CQ6PCB6 329 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 DARS2Q6PI48 645 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 SBSNQ6UWP8 590 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 H2AFVQ71UI9 128 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 C17orf64Q86WR6 236 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 TMEM132CQ8N3T6 1108 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 OTUD6BQ8N6M0 293 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 ZNF610Q8N9Z0 462 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 SLC35G2Q8TBE7 412 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 SMAP2Q8WU79 429 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 DIO2Q92813 273 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 ZFP3Q96NJ6 502 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 KRT12Q99456 494 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 TMEM204Q9BSN7 226 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 LRRC40Q9H9A6 602 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 ANAPC5Q9UJX4 755 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 C15orf41Q9Y2V0 281 aa12.73□□□□□ -0.37
CSNK1D-213ENST00000580446 C17orf105B2RV13 164 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 HRKO00198 91 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 GNB5O14775 395 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 CD3EAPO15446 510 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 NDUFS3O75489 264 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 THBS1P07996 1170 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 CHRM3P20309 590 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 COMTP21964 271 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 TCEA1P23193 301 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 MASP1P48740 699 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 EIF3EP60228 445 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 BTN3A2P78410 334 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 RPS6KA1Q15418 735 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 NHSL2Q5HYW2 709 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 TOR1AIP1Q5JTV8 583 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 LRRC38Q5VT99 294 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 ATG4DQ86TL0 474 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 CDKL3Q8IVW4 592 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 C9orf40Q8IXQ3 194 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 RFLNBQ8N5W9 214 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 ZNF525Q8N782 197 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 FAM83FQ8NEG4 500 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 RDH11Q8TC12 318 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 RILPQ96NA2 401 aa12.72□□□□□ -0.37
CSNK1D-213ENST00000580446 BIRC8Q96P09 236 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms