RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 TPD52L3Q96J77 140 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 SLC35G5Q96KT7 338 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 EPYCQ99645 322 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 SORBS1Q9BX66 1292 aaKnown RBP10.56□□□□□ -0.72
SKA2-204ENST00000578519 TWSG1Q9GZX9 223 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 ING2Q9H160 280 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 CHRDQ9H2X0 955 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 NTN4Q9HB63 628 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 VCX3AQ9NNX9 186 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 GPR27Q9NS67 375 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 HRASLS2Q9NWW9 162 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 CALML5Q9NZT1 146 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 P2RX2Q9UBL9 471 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 BLOC1S6Q9UL45 172 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 PADI2Q9Y2J8 665 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 DUXAA6NLW8 204 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 MYO1GB0I1T2 1018 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 EMC8O43402 210 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 ERAL1O75616 437 aaKnown RBP10.55□□□□□ -0.72
SKA2-204ENST00000578519 SLITRK5O94991 958 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 TBX6O95947 436 aaPredicted RBP10.55□□□□□ -0.72
SKA2-204ENST00000578519 B3GALT4O96024 378 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 CSF2P04141 144 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 ALPLP05186 524 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 NR2F6P10588 404 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 CPN2P22792 545 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 DCTP40126 519 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 NCBP2P52298 156 aaKnown RBP eCLIP10.55□□□□□ -0.72
SKA2-204ENST00000578519 ITGA1P56199 1179 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 HNRNPKP61978 463 aaKnown RBP eCLIP10.55□□□□□ -0.72
SKA2-204ENST00000578519 HHEXQ03014 270 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 HSPB3Q12988 150 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 NDUFA9Q16795 377 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 MPEG1Q2M385 716 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 WDR45BQ5MNZ6 344 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 TPRG1LQ5T0D9 272 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 PRAMEF8Q5VWM4 474 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 PRAMEF7Q5VXH5 474 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 OR52E8Q6IFG1 317 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 SLC48A1Q6P1K1 146 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 C8orf59Q8N0T1 100 aaPredicted RBP10.55□□□□□ -0.72
SKA2-204ENST00000578519 C7orf57Q8NEG2 295 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 TSPAN14Q8NG11 270 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 OR8K5Q8NH50 307 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 NFKBIDQ8NI38 313 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 PROX1Q92786 737 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 TM4SF19Q96DZ7 209 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 TEFMQ96QE5 360 aaKnown RBP10.55□□□□□ -0.72
SKA2-204ENST00000578519 CCDC3Q9BQI4 270 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 NPLQ9BXD5 320 aaPredicted RBP10.55□□□□□ -0.72
SKA2-204ENST00000578519 GABARAPL1Q9H0R8 117 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 EPB41L1Q9H4G0 881 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 EPS8L2Q9H6S3 715 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 CXorf36Q9H7Y0 433 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 LYRM4Q9HD34 91 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 CD93Q9NPY3 652 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 LHX9Q9NQ69 397 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 UBAP1Q9NZ09 502 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 KIF17Q9P2E2 1029 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 FBXW2Q9UKT8 454 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 ASB4Q9Y574 426 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 NUMA1Q14980 2115 aa10.55□□□□□ -0.72
SKA2-204ENST00000578519 BLACEA4D250 179 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 OR5K3A6NET4 321 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 H3BNH8 94 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 M0QX08 132 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 TLR4O00206 839 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 UPK1AO00322 258 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 PROM1O43490 865 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 HS6ST1O60243 411 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 EML2O95834 649 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 C9P02748 559 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 MT-ND1P03886 318 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 FHP07954 510 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 ANXA8P13928 327 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 MATN1P21941 496 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 IFNA8P32881 189 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 TTKP33981 857 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 MAPK10P53779 464 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 C21orf59P57076 290 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 ADARB1P78563 741 aaKnown RBP10.54□□□□□ -0.72
SKA2-204ENST00000578519 KCNC4Q03721 635 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 SLC14A1Q13336 389 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 TCEA2Q15560 299 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 LIN52Q52LA3 116 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 TMEM31Q5JXX7 168 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 RBM48Q5RL73 367 aaKnown RBP10.54□□□□□ -0.72
SKA2-204ENST00000578519 ATAD3BQ5T9A4 648 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 FBXO42Q6P3S6 717 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 FAM92BQ6ZTR7 304 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 THAP5Q7Z6K1 395 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 ZNF687Q8N1G0 1237 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 PJA1Q8NG27 643 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 OR4K14Q8NGD5 310 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 BBS10Q8TAM1 723 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 BAHD1Q8TBE0 780 aaPredicted RBP10.54□□□□□ -0.72
SKA2-204ENST00000578519 SLC37A2Q8TED4 501 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 NR4A3Q92570 626 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 AMDHD1Q96NU7 426 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms